| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2104 |
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| Symbol | |
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| ID | 7259073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 2266906 |
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| End bp | 2269062 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643561996 |
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| Product | PTS system, lactose/cellobiose family IIC subunit |
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| Protein accession | YP_002458576 |
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| Protein GI | 219668141 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000044126 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAAGC GCCTCTTCAG TAATGTTGCT GAGATGAGCG GCGACTACAC TAAATTGATG
GAAAAAGCGG GTGAGAACCT CTTGCTGGCA TCGATCCGGC GGGGGCTTAT TTTAATGATT
CCAGTGGTGC TGATCGGTTC TCTGGCGCTG CTGTTTTCCA GTTTTCCCGT ACCCCAGTAT
CAGGAGCTGA TGGCAAGGCT GTTCGGGCAG AATTGGCAGG ACTTTTTCAT CTATGTCCAC
GATGGTACGA TTGGTATTTT ATCTCTGGCC ATGGTCACCT GCATCACCTA TTCCTTAGCC
ACCGAGCTGG AGAACCGGGA TAAGCTCAGA ATCAATCCCG TGATCGTCTC CACTGTGGCC
TTGTGTTCTT TTGTGGCTCT CTTTGGCATT AATAAAGATG GGTTTAAAAT CACCAATTAT
GGAGTGACCG GGGTCTTTGT TTCCATACTG GTGGCGGTAG CCGCCAGCCT TTTGTTTTAT
AAGCTCAGTT CCATTAAGCT GCTGAGGATC CGGCCCTTTT CCGACGGTGA TTCCATCACC
TTCAGCCATG CCGTAGCCTC GATTATTCCG GCGGCCATCA CGATCACTCT TTTTGCCGCT
GTCAACCAGA TTTTAGCCGC CCTTCTGAAC ATAACCGATA TCAACGATTT CCTTGCCGAC
GTCCTCTATC ATTTGTTCGC CAATATCAAC AATTCCTTTC TGCGGGCGCT GCTGTTTATT
TTTCTGATCC ATTTCCTTTG GTTTTTCGGC ATTCATGGCA GCAATATGCT GGAACATGTG
GCCCAGAGCA TCTATGTACC GGCCCTGGCC ATTAATCAGG AGCTGATCCA GGCCGGCGGG
GAACCTACCC AGATTTTCAC CAAGACTTTC TTTGATACTT TTGTTCTGAT GGGGGGCTGC
GGGAGCACCC TCTGCCTGCT CGTTGCCGTA TTTATGCTGA AAAAGAACAA AAATCAGCGC
CGGATCGCTA AGTTTTCTCT GTTCCCCCTC CTTTTTAACA TCAATGAGCT GATTGTCTTT
GGCTTTCCTC TGGTCCTGAA CCCCATCTAT CTGATCCCCT TCCTGCTGGT GCCCCTGCTT
TTGACCGTGA CCTCGTATGC CGCCGTAAGC CTGGGGCTGG TCCCTTTCAC GATTCAGACG
GTAGAATGGA CGACGCCGGT TTTTATCAGC GGCTACTATG CGACAGGGTT TTGGAGCGGC
TGCCTATTGC AGCTCTTTAA CCTGATTCTG GGAACCCTGT GCTATATACC CTTTGTTAAG
CTGTCCCAGA CTGTTTCGGT ATCCAGGCTG AAAAAGAACT TTGAGACCCT TTGCGCGGAG
TTCAAAAAAT CGGAAAGAAG CAACAAAAGG CATAGTCTTT TGGAGCGGCA GGATATGCTC
GGCAGCTTGG CCAAAGCCTT GGCTGAGGAT CTGAAATACG ATATCGAAAC CAAGAAGCTG
ACCTTGTTTT ATCAGCCCCA GGTGGATTAT GAGGGGAAGG TGTTCTGCGC CGAAGCCCTG
CTGAGATGGA ATCATGTTCA TTACGGTACC ATTTATCCGC CCCTGGTCAT TGCGCTGGCT
GAGGAATATC AGCTCATCGA TGAACTGGGG CTGGAGATCA TTGACCAAGC CTGCAGTACG
ATTAAGATCA TGGCTGCCCT TGGGTTCACC GAGATGGCCG TTTCAGTGAA TATTACCGCT
TCCCAGCTTG AAAACCAAGA CTTCCCCGGC AAGCTCAGGC AGCTTATCGA AAAACATCAG
ATCAGCCCTA AGGCCTTAAA AATTGAGATT ACGGAACAGG TGGCCCTGGA AAACAACAAG
TGGATCAAGG ATACCCTCAA TGCCCTCAAG GAGATGGGAA TTGAGCTGGA GATGGATGAT
TTCGGAATGG GCCACAGTTC GCTGATGTAT CTGAAGGAAT ATAATTTCGA TACGGTCAAG
CTGGACGGCT CCCTTGTGCG TGAAATCTCC ACCAACATGA ACTGCCGTGA CATTATTTCT
TCCATCATCT ATTTAAGCCG CTCCATGAAT TATGCTGTTT TGGCTGAATT CGTGGAGACG
GAAGAGCAGC GGCAGATCCT TCATGAGCTG GGCTGCGACC TCTACCAGGG CTATCTTTAC
AGTCCGGCCA TTCCCTTGGC GGATCTCCTG GTTTATATCA GGAGAAGCCA AGGCTGA
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| Protein sequence | MHKRLFSNVA EMSGDYTKLM EKAGENLLLA SIRRGLILMI PVVLIGSLAL LFSSFPVPQY
QELMARLFGQ NWQDFFIYVH DGTIGILSLA MVTCITYSLA TELENRDKLR INPVIVSTVA
LCSFVALFGI NKDGFKITNY GVTGVFVSIL VAVAASLLFY KLSSIKLLRI RPFSDGDSIT
FSHAVASIIP AAITITLFAA VNQILAALLN ITDINDFLAD VLYHLFANIN NSFLRALLFI
FLIHFLWFFG IHGSNMLEHV AQSIYVPALA INQELIQAGG EPTQIFTKTF FDTFVLMGGC
GSTLCLLVAV FMLKKNKNQR RIAKFSLFPL LFNINELIVF GFPLVLNPIY LIPFLLVPLL
LTVTSYAAVS LGLVPFTIQT VEWTTPVFIS GYYATGFWSG CLLQLFNLIL GTLCYIPFVK
LSQTVSVSRL KKNFETLCAE FKKSERSNKR HSLLERQDML GSLAKALAED LKYDIETKKL
TLFYQPQVDY EGKVFCAEAL LRWNHVHYGT IYPPLVIALA EEYQLIDELG LEIIDQACST
IKIMAALGFT EMAVSVNITA SQLENQDFPG KLRQLIEKHQ ISPKALKIEI TEQVALENNK
WIKDTLNALK EMGIELEMDD FGMGHSSLMY LKEYNFDTVK LDGSLVREIS TNMNCRDIIS
SIIYLSRSMN YAVLAEFVET EEQRQILHEL GCDLYQGYLY SPAIPLADLL VYIRRSQG
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