| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2100 |
|---|
| Symbol | |
|---|
| ID | 7259069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 2263509 |
|---|
| End bp | 2264363 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643561992 |
|---|
| Product | transcriptional regulator, MerR family |
|---|
| Protein accession | YP_002458572 |
|---|
| Protein GI | 219668137 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.444835 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGACTG TAAAACAGGT TTCCGCATTA ACAGGTGTTA GTGTCAGAAC ACTCCAATTC
TACGACGAAA TTGATTTGTT CAAACCGACC CAAGTTAACG ATGCAGGCTA CAGATTATAT
GATGATGCTT CCTTGGAACT ATTGCAGCAA ATATTGTTTT TCAAAGAGCT TGATTTTACC
CTGAGAGAGA TAAAAGCCAT CATGGCTAAC CCCCACTTCG ATAAAGTTGA AGCCTTCAAA
AAGCAAAAGA CTTTAATTCA ACTCAAACGG GATAGGCTGA ATAGGTTGCT CAGTCTATTG
GCGAAACTGG AAAAAGGAGA AAAGATTATG AGCTTTAATG AATTTGATAT GAGCGGTTAC
TTCCAGGCTT TAGAAGAGTT TAAAAAAACT CATGCCGATG AAATTCTTAA GAAATTTGGC
GATATTGATG CATTTGATGA AATGGTCGGT GAGCTAAAAG CAAAGGCCTC GGATATTGCT
GAACTTGCCG TCAAACAGTA TGGCAGCATC GAAAACTATA CTAGAGCTTC CGAAAAAAAC
TTGGAAAACT ATCTGAAAAA CGGTACGGAG ACCATCGATG TCGAGGAATC CATGGCCAAG
ACAGATTCAC TTACCCGGCA GCTTACAGCG GATTTAAGCA AAGATGTTTC CTCTCAAGAA
ATCCAAACAA TGATTCTGGA ACTTATTGAT TTATGCAATC AAGGCCACAA TGGTCTGGAT
ATGGGAGAAA ACTACTGGGC TTTTATGGCC GAAAATTACC TTACCAATCC CCTCTTTATC
AGCACCACAG ATCAAAAATA CGGTGAGGGT GCCGCAGAGT TTATCGGCAA AGCCTTAAAG
ATTCATTTAG GGTAA
|
|---|
| Protein sequence | MRTVKQVSAL TGVSVRTLQF YDEIDLFKPT QVNDAGYRLY DDASLELLQQ ILFFKELDFT
LREIKAIMAN PHFDKVEAFK KQKTLIQLKR DRLNRLLSLL AKLEKGEKIM SFNEFDMSGY
FQALEEFKKT HADEILKKFG DIDAFDEMVG ELKAKASDIA ELAVKQYGSI ENYTRASEKN
LENYLKNGTE TIDVEESMAK TDSLTRQLTA DLSKDVSSQE IQTMILELID LCNQGHNGLD
MGENYWAFMA ENYLTNPLFI STTDQKYGEG AAEFIGKALK IHLG
|
|---|
| |