| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2082 |
|---|
| Symbol | |
|---|
| ID | 7259051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2245485 |
|---|
| End bp | 2247191 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643561975 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002458555 |
|---|
| Protein GI | 219668120 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000211004 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATGC TTCGCAATTT AACTACTGCT AAAAAAATCA TCAGCATAAT CCTTCTCATG
AGTCTGTTTA TCCTTAGCGT TGGGGGAGTA GGCTATAGTT ATACCCATGT TGTGAGTTCA
GAGATTACAG ATATGTACAG TAATAATCTG TTGCCCGTGA AATGGCTTAA TCAAGTTCGG
GCTGACAACA GGTTGGTTGA AGAATTGTCC ATGAAAATCA TGTTGACCGA TCAGGATCAG
GCAACAGAGG ACGAAGAATT GAAGACAATA AACGAAACCA TTGCGGAAAT TCAAACCTTG
ATTAGCCAAT ATAAAGGAAC CGCTCTTGAT TCTTTTGAGT CGGAAAAACT TGCATCGATC
ACCAAGAATC TTGATGCTTA TGGGACTGTC CATGAAAAGG TCCTGAATTT GGCGGCCAGT
GGGGAAAAAA CCACTGCTTA TGCCCAGTTC ACCGAAAATG CGGCGCCCTT AATGATGGAC
ATAAATTCTG CTCTCAATGA ATTAGCTGAT TACAAGAGCC AAAAGGCTGA TCAGGAAATG
AATAACGCCC TTGCCGGCCG GGATATGGCC AAGAAAATGA TTTTGATAAT TACGCTTATT
GCTATCGTCG TATCCTTGAC GGTAGGATTG ATGGCAGCAA GGACGATCAG CAAACCCCTG
GCTGCCGCAG TAAAGCAAAT AGGGCAGGTA GCGGAGGGAA ATCTGGATAT AGAGCAAGTG
AAGGTCAACG CCGCCGATGA AGTGGGTCAA CTGGGGATAG CTGTCAATAC TATGTTGGTT
AAGATGAGAG AGCTTGTCAC ACATGTAGCT GATTCGGCCA ATATAGTGTC CTCTTCTGCG
GAAGAGCTAT CGGCCAGCTC AGAACAATCG GCCTATGCCA ATAACCAGAT TGCCGATGCC
ATTAAAGACG TGGCTTGGGG AGCGGAAAAA CAGGTAGCTC AAATCAATGA GACTTCAAGA
GTTTTTGAGC AAATATCAGC CCATATACAA CAAATAGCGG TGAACACCAA CCAAGTGGTT
ACATTATCGG ATAAAACAGA TGAATCCGCC TCATACGGAG GAACAGCTAT CAGTTCCGCG
GTCAGTCAAA TGAGAAATAT CGAAAAAACA GTGGAAACCT CTGCAGAAAT GGTTGCCAAG
TTGGGAGAAA AATCCGATGA AATCGATCAG ATTGTTACGG CAATATCCCA AATCGCTGCT
CAGACCAATC TATTGGCCTT GAACGCAGCC ATTGAGGCCG CCCGGGCGGG TGAAAGCGGA
AGAGGATTTG CAGTGGTGGC GGATGAGGTC CGGAAATTGG CTGAACAGTC ACAGAAGGCA
TCCAAGCAGA TAGCTGAAAT GATCAGAGAA GTTCAGGAAG GTACGAAAAA AGCTATGGCC
GCTATGAAGG CCGGTAGCCA TGAAGTGAAA ATCGGTACGG AAGTGGTGAA TAATGCGGGA
GTCGCTTTTG CAGATATTGT AACTCTAATC AATCAGGTAT CCGGGAAAAT GAGAGAAATA
GCTTTGGCAA TCCAGCATGT GGCCGATGGG AGCCAGCAAA TCGCGGCTTC AGTTCACGAG
ATTTCAGAGA TCAGTGTGGA TACTGCGGAA CATGTTTCAT ACCGTCTCAG CGGCAACTCA
GGAACAGACT GCTTCGGTGG AACAAATAGC CGCTTCAAGC CAAAATCTTT CCAGCATGGC
AGCGGAGTTG CTGGCAAGTA TACATAA
|
|---|
| Protein sequence | MQMLRNLTTA KKIISIILLM SLFILSVGGV GYSYTHVVSS EITDMYSNNL LPVKWLNQVR
ADNRLVEELS MKIMLTDQDQ ATEDEELKTI NETIAEIQTL ISQYKGTALD SFESEKLASI
TKNLDAYGTV HEKVLNLAAS GEKTTAYAQF TENAAPLMMD INSALNELAD YKSQKADQEM
NNALAGRDMA KKMILIITLI AIVVSLTVGL MAARTISKPL AAAVKQIGQV AEGNLDIEQV
KVNAADEVGQ LGIAVNTMLV KMRELVTHVA DSANIVSSSA EELSASSEQS AYANNQIADA
IKDVAWGAEK QVAQINETSR VFEQISAHIQ QIAVNTNQVV TLSDKTDESA SYGGTAISSA
VSQMRNIEKT VETSAEMVAK LGEKSDEIDQ IVTAISQIAA QTNLLALNAA IEAARAGESG
RGFAVVADEV RKLAEQSQKA SKQIAEMIRE VQEGTKKAMA AMKAGSHEVK IGTEVVNNAG
VAFADIVTLI NQVSGKMREI ALAIQHVADG SQQIAASVHE ISEISVDTAE HVSYRLSGNS
GTDCFGGTNS RFKPKSFQHG SGVAGKYT
|
|---|
| |