| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2073 |
|---|
| Symbol | |
|---|
| ID | 7259042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2236934 |
|---|
| End bp | 2237710 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643561966 |
|---|
| Product | HpcH/HpaI aldolase |
|---|
| Protein accession | YP_002458546 |
|---|
| Protein GI | 219668111 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTAA AGAAAAAATT AAGCGCTGGG AAATCCGTGG TGGGAACCAT GCTCAATCTT
GTTTACAACC CTGATATCGT CCGCATCTAC GCCGAAGCCG GTCTCGATTA TTTCATTGTC
GATTGCGAGC ACGCGGCCTA TACATTTCGC GAAATAAATC ACTTGGTTTC TGTGGCGAAG
AACGCCGGGG TCTCTGTATT GGTCAGGATT CCTCAGGTAG ATCGGGCCCA TGTGCAGAGG
TTATTGGACA TTGGCGCAGA GGGTTTTATG ATTCCAGGTG TCCAATCGGC TGAGACGATG
AGAGAGACCG TCCGTCTGGC CAAATACCCT CCCCTGGGAG AAAGAGGAGT AGGCGGCAGT
ATTGTCACGG ATTTCAAACC TGTTAACTGG GCGGAATGGG TACAGGAGCG CAATGATGAA
ATCTTCATTA TGGCCCAGAT TGAGCATGTC AAGGCAGTGG AGGATATAGA CAGCATCCTC
GCTGTCCAGG GAGTGGATGC CGTAATTTTT GGCCCGCGGG ATCTTTCCAA TGATCTGGGA
ATCATCGGGC AAACCGAACA TCCTAAGGTT TACGAGTGCT ATGAAAAGGT CTATAGGGCC
GCCGACCGGC AAGGAGTTGT CAAAGGCTTT TTCACTGCGG CAGATGCTGC CAAAATGGGC
TGGGCTGTGG AGCGGGGAGC ACAGATGCTG CTGTGGTCGG GGGATGTTGC CGCTCTGCAG
ACCTATACCG CCAAGGGAGT GAAAACGATT AAAGAGCTTC CTGGTTTCAA CCCCTGA
|
|---|
| Protein sequence | MFLKKKLSAG KSVVGTMLNL VYNPDIVRIY AEAGLDYFIV DCEHAAYTFR EINHLVSVAK
NAGVSVLVRI PQVDRAHVQR LLDIGAEGFM IPGVQSAETM RETVRLAKYP PLGERGVGGS
IVTDFKPVNW AEWVQERNDE IFIMAQIEHV KAVEDIDSIL AVQGVDAVIF GPRDLSNDLG
IIGQTEHPKV YECYEKVYRA ADRQGVVKGF FTAADAAKMG WAVERGAQML LWSGDVAALQ
TYTAKGVKTI KELPGFNP
|
|---|
| |