Gene Dhaf_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2054 
Symbol 
ID7259023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2215488 
End bp2216450 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content52% 
IMG OID643561947 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_002458527 
Protein GI219668092 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTCAAT ACACGGTATT ATCAACTTCT CCGACATTTA CAAAATATTC GCCTCAAGCT 
GCCGGCATTT TAGAAAAGAA GGGTTGTCGG CTGGTCATGA TTCCTCCCAA CGGACTGCGC
GAAAGGGAGG ACTTTAAAGC TGTTTTGGCT GAAGCTCATG TCTGGGTGGT GGGTATTAAC
AAAGTATACG CCGAGGACCT GGAAGCCGCC CCCAATCTGA AGCTGATCAT CAAACATGGT
ACCGGTGTGG ACAGCATTGA CTTAAAAGCG GCTGCCGCCA GGGGAATTAC CGTAGCCAAC
GCCCCCGGGA CCAACGCCAA TTCAGTTGCC GATCTGGCCT TCGGCTTTAT GCTTAGTCTG
GCCAGGCAGA TTGTTTCGGC GGATAAGCGT ACGCGGGACG GCTTCTGGGG CACTGTCATG
GGCAAAGATG TTTACGGCAA AACCCTGGGC GTTTTAGGGC TGGGACAGAT CGGCAAAGGA
GTGATCCGCA GGGCGAGCGG ATTTGATATG AACATCTTGG GCTATGACCT GGTCCATCAC
AGTCAATTTG AAAAGGAATA CCGGGTGAGG GCTGCGACTT TGGAGGAAAT TATGTCCGAG
GCGGATTATA TTTCCGTCCA TTTGCCCCTC CTGGAGAGCA CAAAAAATAT CATCGACCGC
AGTTTGCTGG AAAAAATGCG CCCCACAGCC TTTCTCATCA ATACCAGCAG AGGAGGCGTG
GTTGACGAAA CAGCCCTCTA TGATCTGCTG AAGGAAAAAA GGATAGCGGG AGCCGCTTTG
GATGTCTTTG CCACAGAGCC GCCCCGGCAG TCACCGTTTT TTGAATTGGA CAATGTTATT
GTAGCGCCGC ATATGGGCGC CTATACAGAA GGGGCAATGG GAGCCGTCAG TGAAATCTTG
GCGGAGAGCA TTGTCCGGGT TTTGGCAGGA AAAGAACCAC TATCGGTCAT TAAGACGAAC
TAA
 
Protein sequence
MAQYTVLSTS PTFTKYSPQA AGILEKKGCR LVMIPPNGLR EREDFKAVLA EAHVWVVGIN 
KVYAEDLEAA PNLKLIIKHG TGVDSIDLKA AAARGITVAN APGTNANSVA DLAFGFMLSL
ARQIVSADKR TRDGFWGTVM GKDVYGKTLG VLGLGQIGKG VIRRASGFDM NILGYDLVHH
SQFEKEYRVR AATLEEIMSE ADYISVHLPL LESTKNIIDR SLLEKMRPTA FLINTSRGGV
VDETALYDLL KEKRIAGAAL DVFATEPPRQ SPFFELDNVI VAPHMGAYTE GAMGAVSEIL
AESIVRVLAG KEPLSVIKTN