| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2038 |
|---|
| Symbol | |
|---|
| ID | 7259007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2197702 |
|---|
| End bp | 2198622 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643561931 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002458511 |
|---|
| Protein GI | 219668076 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000000000367064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGG AACAGTTGCA TTATTTAAAA GAAGCGATTC GTTACCGATC CTTGTCTATT
GCAGCACGGG AGAACTTTAT CTCTCAGCCT TCCTTCAGCG CAGCCATTAC CGGTTTAGAA
AAAGAACTGG GTGTCAAGCT TTTAAACCGT TCCAACCGTG GCTGCACCCC CACGGATATC
TGTATGGAAA TTATGGATAG AGCAGATACA ATATTTGCCA TGGTTGAAGA AATTGAACTG
CTGGCCAGCA ATAGTTCATA TTGTGAGACC ATTAATATTG CCGTCGTGTT GAGTATCTGC
GAAGAAATCC TGCCTCAGGT GCTTTTGGAG ATGGAGGCTG ACAAAGTATT TTGTAAGGTA
GCTGTGGCAT CTTTAGAGGG TGAAGCGATC TATCCCCGTG TTGCCTCAGG GAGTTCGGTT
TTAGGGATAG TAGCCTACAT CCCCAAATTG CTCACAGCCG ATCTCAAGTA CACCCCCCTC
TTTGAAGATG AGTATGTACT CTATATTGGT CAGCATTCTC CTTTTTGGGA GCAAGGGAGC
GTGTCCTTGG AGCAAATGCT GAGTCAGCCT TATATTGCAC TGGGGGATGA CTTCGCTACC
CCGAACAGTG ATTGGGCTAA GGATATTCTG GCTTTCTCCA TGCCCAAGGT GGAATCCCAG
GTCAGCAATT TAAACACCTT GAAAAAGATG ATCATCAACG GCCCCTATGT GTCACTTCTC
CCGCGCTTTA TGGTGGCCGA CGATATCTAT GTTAAACATA ATTTGATGAA GCCGGTGCGG
ATTGACGATA TTTATTTAGC GGCTCAGTTT GGTTACATTG AGAATACCCG CTATAAGCTG
ACCAAAAATT ACACTGTTTT TTTGGATTAC TTCAGGAAGA TCCTGACCAG ACTGGGATAC
ACCGTCTATA AAACGGTTTA A
|
|---|
| Protein sequence | MKLEQLHYLK EAIRYRSLSI AARENFISQP SFSAAITGLE KELGVKLLNR SNRGCTPTDI
CMEIMDRADT IFAMVEEIEL LASNSSYCET INIAVVLSIC EEILPQVLLE MEADKVFCKV
AVASLEGEAI YPRVASGSSV LGIVAYIPKL LTADLKYTPL FEDEYVLYIG QHSPFWEQGS
VSLEQMLSQP YIALGDDFAT PNSDWAKDIL AFSMPKVESQ VSNLNTLKKM IINGPYVSLL
PRFMVADDIY VKHNLMKPVR IDDIYLAAQF GYIENTRYKL TKNYTVFLDY FRKILTRLGY
TVYKTV
|
|---|
| |