Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2037 |
Symbol | |
ID | 7259006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 2194046 |
End bp | 2197498 |
Gene Length | 3453 bp |
Protein Length | 1150 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643561930 |
Product | hydrogenase, Fe-only |
Protein accession | YP_002458510 |
Protein GI | 219668075 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.163812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGAAG TAACGAAGCA GCAACGAATC AGGGTAACTG TCAATGGACG ACAGATGGAA GTCTATGGTG ATCTGACGAT TCTTCAGGCT TTGCTTCAGG AGGATATCCA TATCCCCCAT TTATGTTACG ATATCCGACT GGAGCGTTCT AACGGCAACT GCGGGCTATG TGTGGTGGAG TTGGGAGAAG GCAGCGAACA ACAGGATGTG AAAGCCTGCC ATACTCCGAT TCAGGAAGGT ATGATCATTC ATACCAACAG TCCGAGGCTG GAGCATTACC GCAAAATTCG TCTGGAGCAG ATTCTGGCGG ATCATAATGC CGACTGTGTG GCACCCTGCG TCATGACCTG CCCGGCCAAT ATCGATATCC AGTCTTACCT GAGCCATGCC GGCAACGGCA ATTTTGAGAC GGCGATTAAG GTCATTAAGG AGCGCAACCC TTTTCCCATC GTTTGCGGAA GAGTCTGCCC TCATTCCTGT GAGGCCCAAT GCCGCCGGAA TTTAATCGAT GAGCCGGTGG CCATCAATCA TGTCAAACGA TTTATTGCCG ACTGGGATAT TGCCCATGAA CAACCCTGGG CCCCTCGTAA AAAAGCGGCT ACCGGCAAAA AAATTGCCGT GGTGGGCGCC GGTTCCTCCG GGCTGAGCGC TGCTTATTAC AGCGCCATTC AGGGACATGA TGTCACAGTA TTCGAACGCC ATCCCCGGGC CGGGGGCATG ATGCGTTACG GAATTCCGGA ATATCGCCTC CCCAAGGAGA CTCTGGATCG GGAGATCGGG CTGATTGCCG ATCTGGGCGT CAAAATCATG ACCAACAAAG CCCTGGGCAC TCATATCCGG TTGGAGGATC TGCATCAGGA CTTTGATGCA GTCTATCTGG CCATTGGTTC CTGGCGGGCA ACACCCCTGC AGATCGAAGG AGATAATCTG GAAGGAGTCT GGCTGGGCAT CAACTTCCTG GAGCAGGTGA CGAAAGGAGC GGATATTAAG CTGGGTGAGC ATGTGGTCGT CATCGGCGGC GGCAATACGG CCATCGACTG CGCCCGGACC GCGCTGCGCA AAGGGGCGGG CTCCGTCAAA CTGGTCTATC GCCGGACCCG GGAAGAAATG CCTGCGGAAT CCTATGAAGT GGAGGAAGCA ATTCACGAGG GGGTTGAAAT GTACTTTTTA ACCGCCCCCC ATAAGATCGT CGCCGAAGGC GGGCGCAAGC TGCTTCATTG TATCAAGATG ACCCTTGGGG AGCCGGACCG TTCCGGCCGG CGCCGGCCCA TTCCCATCGA AGGCAGCGAG ACGGCCTTTG AAGCGGATAC GATTATCGGG GCCATCGGTC AAAGCACCAA TACCCAGTTC TTATATCATG ACCTTCCTGT CAAACTGAAT AAGTGGGGAG ATATCGAAAT CAACGGCAAG ACCATGCAGA CTTCCGAGAT GAATATCTTT GCCGGCGGCG ACTGTGTCAC AGGTCCGGCT ACAGTCATTC AGGCCGTGGC GGCCGGACGT CATGCGGCGG AGGCCATGGA CAGCTTTTTG ATGAAAGGCT ATGTCAAGGA GCAGCCTATG GATTACAGCT GCAGCCGTGG GTCCCTGGAA GATCTGCCTC AGTGGGAATT CGAGAAGATT CCGCGGCTGA AACGGGCCCC CATGCCGGCC CTGCCACCGG CGGAACGACG GGATAATTTC CGGGAAGTGG AGACAGGGCT CAGTGAAGAG ACAGCAAGAG CGGAAGCCCG GCGCTGCTTA AAATGCGGCT GCTATGAGCG TTATGACTGT GACTTGCGCC AGGAAGCCAG CCTGCACCAT GTTGAGTTTA AGAAGCCGGT CCATGAACGT CCTTATATCC CCATCGTCGA GGATCATTCC ATCATCATCC GCGACCACAA TAAATGCATC TCCTGCGGCC GCTGCATTGC CGCCTGCGCA GAAGTGGAAG GTCCCGATAT TTTGAGCTTC TATATGAAGC ATGGCCGTCA GCTGGTGGGG ACGAAGAGCG GACTGCCCCT GGATCAGACC GACTGCGTCA GCTGCGGTCA GTGTGTGAAT GCCTGTCCTT GCGGCGCTTT GGATTACCGC AGTGAAATCG GCAGGGTATT CAGAGCCATC AATGATCCGG GCAAAACGAC CGTAGCGTTT GTGGCTCCGG CAGTGCGCAG TGTGGTCTCT TCCCAGTATG GGGTTTCCTA TCAGGAGGCT TCCCGGTTTA TTGCCGGACT TCTGAAAAAG ATCGGCTTTG ATAAAGTTTT TGATTTTACC TTTGCGGCGG ATTTGACCAT TGTGGAAGAA ACCACAGAAT TTTTAACCCG CCTGCAAAGC CATAAGCCGA TCCCCCAGTT CACCTCCTGT TGTCCGGGCT GGGTCAATTT CGTGGAGCGC CGCTATCCGG AAATCATTCC CTATCTCTCC AGCTGCAAAT CCCCCCAGAT GATGATGGGA GCTACGGTGA AAAATCACTT TACGGAACTG ACGGAAATCG ACCCCAAGGA TCTTTATGTG GTTTCCATTG TTCCTTGCAT AGCCAAAAAG TATGAGGCAG CCCGACCGGA GTTCAGGTCA GAGGGAATCC GGGATGTGGA TGCTGTGTTG ACCTCTACCG AAATGCTGGA AATGGCGGAT ATTAAGTTGA TCGAGCCCGC CGATGTGGAG CCTCAGGATT TCTGCGAACC CTATAAACGG GTATCCGGGG CGGGGATTCT CTTTGGGGCC TCAGGGGGCG TGGCGGAAGC GGCCCTGCGG ATGGCGGTGG AGAAACTGAC CGGGGAGGTC TTGACAGACC AGCTGGATTA TCAGGAAGTG CGCGGACTCC AGGGGATCAA AGAGGCTGCC GTGGAAGCCA AAGGCAAGAA GGTCAATGTA GCGGTGATCA GCGGACTGCA CAATGTTGAG CCGATTCTGG AGAAGATCAT TGAAGGTATG GAAGTAGGCT ATGATCTGAT CGAAGTGATG GCCTGCCCGG GGGGCTGTAT CTGCGGAGCG GGACATCCGG TGCCGGAGAA GATCGATACT CTGGAGAAGC GGCAGCAGGT TCTCGTCAAT ATCGATCAAA CCTCCCGGTA TCGCAAATCT CAGGAAAACC CCGATATCCT GCGCCTTTAT GATGAGTATT ACGGAGAAGC CAATTCACCC CTGGCCCACA AATTGCTGCA CACCCATTAT GAAGCTGTGA AAAGGGAACC TGTTGCCAAA CATGACCGTA GAATGGCGGA TTCCGCTTTT GTAACCCATG AGCTTACTCT GTGTACCTGT GATAAATGTA CGGCTCAAGG TTCAAGAGAA TTGTTCGCGG CACTTTCCGG GAAGATCCGG AAGCTGAAAA TGGACTCCTT TGTCACGGCC AGAACCATCC GCTTAAAGGA AAATCATCCC GGCCAAGGAG TGTATGCCGC CATTGACGGG AAGCTGATAG AAACCCCGGT GGAGCAGCTT GAGCAGCGGA TCTTTCAGCA TCTTATTCGC TGA
|
Protein sequence | MKEVTKQQRI RVTVNGRQME VYGDLTILQA LLQEDIHIPH LCYDIRLERS NGNCGLCVVE LGEGSEQQDV KACHTPIQEG MIIHTNSPRL EHYRKIRLEQ ILADHNADCV APCVMTCPAN IDIQSYLSHA GNGNFETAIK VIKERNPFPI VCGRVCPHSC EAQCRRNLID EPVAINHVKR FIADWDIAHE QPWAPRKKAA TGKKIAVVGA GSSGLSAAYY SAIQGHDVTV FERHPRAGGM MRYGIPEYRL PKETLDREIG LIADLGVKIM TNKALGTHIR LEDLHQDFDA VYLAIGSWRA TPLQIEGDNL EGVWLGINFL EQVTKGADIK LGEHVVVIGG GNTAIDCART ALRKGAGSVK LVYRRTREEM PAESYEVEEA IHEGVEMYFL TAPHKIVAEG GRKLLHCIKM TLGEPDRSGR RRPIPIEGSE TAFEADTIIG AIGQSTNTQF LYHDLPVKLN KWGDIEINGK TMQTSEMNIF AGGDCVTGPA TVIQAVAAGR HAAEAMDSFL MKGYVKEQPM DYSCSRGSLE DLPQWEFEKI PRLKRAPMPA LPPAERRDNF REVETGLSEE TARAEARRCL KCGCYERYDC DLRQEASLHH VEFKKPVHER PYIPIVEDHS IIIRDHNKCI SCGRCIAACA EVEGPDILSF YMKHGRQLVG TKSGLPLDQT DCVSCGQCVN ACPCGALDYR SEIGRVFRAI NDPGKTTVAF VAPAVRSVVS SQYGVSYQEA SRFIAGLLKK IGFDKVFDFT FAADLTIVEE TTEFLTRLQS HKPIPQFTSC CPGWVNFVER RYPEIIPYLS SCKSPQMMMG ATVKNHFTEL TEIDPKDLYV VSIVPCIAKK YEAARPEFRS EGIRDVDAVL TSTEMLEMAD IKLIEPADVE PQDFCEPYKR VSGAGILFGA SGGVAEAALR MAVEKLTGEV LTDQLDYQEV RGLQGIKEAA VEAKGKKVNV AVISGLHNVE PILEKIIEGM EVGYDLIEVM ACPGGCICGA GHPVPEKIDT LEKRQQVLVN IDQTSRYRKS QENPDILRLY DEYYGEANSP LAHKLLHTHY EAVKREPVAK HDRRMADSAF VTHELTLCTC DKCTAQGSRE LFAALSGKIR KLKMDSFVTA RTIRLKENHP GQGVYAAIDG KLIETPVEQL EQRIFQHLIR
|
| |