Gene Dhaf_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2014 
Symbol 
ID7258983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2165724 
End bp2167457 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content51% 
IMG OID643561907 
ProductABC transporter related 
Protein accessionYP_002458487 
Protein GI219668052 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000880254 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAAAT TAGTTAAGTA TCTTAGCTCT TATTACGGGT ATATTCTTGG TGCCGTTGCC 
TTGCTGTTTT TACAGGCCAA CTGTGATTTG GCTTTACCGG ATTATATGTC GGATATCGTC
AATACCGGAG TCATGACCGG AAATACGAAT TATATCCTGA AAACGGGGGC GACCATGCTC
CTGATCACGC TCCTGGGAAC GGCCGCTTCC GTGATGGTGG GCTATTTTGC TGCGCGGACG
GCGGCAGGGG TGGCCCGGGA TTTGCGTTCG GGCGTTTTTA AGAAAGTCGA GCAGTTCACT
CATGCTGAGT TCGATCATTT CTCCACGGCT TCCTTAATTA CACGGACCAC CAACGATATC
ACCCAATTGC AAACTGTGTT AGTCATGATG ATCCGCCTGG TGTTTTATGC TCCGATTCTG
GGAGTGGGCG GGGTCATCAA AGCCATTTCC AGCAGTTCGT CCATGTCCTG GATTATCGGG
ATTGCCGTTC TCTGTCTCAT CGGGGTCGTG GTCATCTTAT TTATCGTGGT CATCCCCAAG
TTTAAACTCA TTCAATCCCT GATCGACCGC TTGAATTTGG TGGCTCGGGA AAACATCGAA
GGAATGCTGG TGATCCGGGC CTTCAACACC CAAAAGTTCG AGGGCGCCCG CTTTGACAAA
GCCAACCGGG ATCTGCTGGA GACGAACCTT TTCGTCAACC GGGCTATGGC TTTGATGATG
CCGGTCATGA TGCTGATTAT GAATCTGGTT ACGGTGATTA TCGTCTGGGT GGGTGCCAAA
CATGTCTCAG CTTTTCAAAT GGGTATCGGC GACATGATGG CCTATATGCA ATATGCCATG
CAGATCATTA TGGCCTTTTT AATGATGTCC ATGATGTTTA TTATGTTCCC CCGGGCAGCG
GTGGCGGCAG ATCGGATTGC CGAGGTTCTG GAGAAAGAGG AAAGCATTGC CGACCCTGAG
GAACCGGCCT CTTTCCGGGA AGAGTTTCAG CCGACGATTG AATTCCGGAA TGTGAACTTT
GCTTATCCCG GAGGGGAAGA TGCGGTTCTG CATAATATTA ATTTTCTTGC CCCAGCAGGT
CAGACCACAG CCATTATCGG CTCTACAGGC AGCGGTAAAT CCACCCTGCT GAATCTGCTC
ATGCGCTTCT ATGATGTAAC TGCCGGTGAA ATCCTGGTGG ACGGCCAGGA TATCCGCACC
GTCACCCGGC GATCCCTGCG GGAAAAGATC GGTTATATTC CCCAAAAGAG CACTCTTTTC
TCGGGTTCCA TCCGCTCCAA CCTATCCTAT GGAGATAAAA AGGCCACCCA GGAGACCTTA
GCCAAGGCAG CCGAGATTGC CCAGGCCACC GAATTTATCG CGGCCAAGGA AGAAGGCTAT
GACTCGGTCA TCGCCCAGGG CGGCACCAAT GTTTCCGGAG GCCAAAGGCA GCGTCTGTCC
ATTGCCAGAG CGTTGGTAAA AAATGCACCA ATCTACCTTT TTGATGACAG CTTTTCCGCC
CTTGATCTGA AGACCGATCG GAACCTGCGG GGGGCTTTGC AGCGGGAAAC CGGGACCAGC
ACGATCCTTT TGGTAGCCCA GCGGGTCAGT ACGATTATGA ATGCCGAACA AATTATTGTC
CTGGACAATG GCCGTATTGT AGGTAAAGGG ACTCACAATG AACTCTTGCA AACATGCGAA
GTCTATCAGG AAATCGCCTA TTCGCAATTA AGTGAGGAGG AACTGGCGAG ATGA
 
Protein sequence
MVKLVKYLSS YYGYILGAVA LLFLQANCDL ALPDYMSDIV NTGVMTGNTN YILKTGATML 
LITLLGTAAS VMVGYFAART AAGVARDLRS GVFKKVEQFT HAEFDHFSTA SLITRTTNDI
TQLQTVLVMM IRLVFYAPIL GVGGVIKAIS SSSSMSWIIG IAVLCLIGVV VILFIVVIPK
FKLIQSLIDR LNLVARENIE GMLVIRAFNT QKFEGARFDK ANRDLLETNL FVNRAMALMM
PVMMLIMNLV TVIIVWVGAK HVSAFQMGIG DMMAYMQYAM QIIMAFLMMS MMFIMFPRAA
VAADRIAEVL EKEESIADPE EPASFREEFQ PTIEFRNVNF AYPGGEDAVL HNINFLAPAG
QTTAIIGSTG SGKSTLLNLL MRFYDVTAGE ILVDGQDIRT VTRRSLREKI GYIPQKSTLF
SGSIRSNLSY GDKKATQETL AKAAEIAQAT EFIAAKEEGY DSVIAQGGTN VSGGQRQRLS
IARALVKNAP IYLFDDSFSA LDLKTDRNLR GALQRETGTS TILLVAQRVS TIMNAEQIIV
LDNGRIVGKG THNELLQTCE VYQEIAYSQL SEEELAR