Gene Dhaf_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2010 
Symbol 
ID7258979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp2161736 
End bp2162317 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content44% 
IMG OID643561903 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002458483 
Protein GI219668048 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.267977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAA AGAAAGAAAT CGGTCAGTCC GAAAAAATCC TCAATGCAGC TGTCCTATGT 
ATATCCACAA AGGGCTATGC CAGTGTATCC CTGCGGGATA TAGCCGATGA GGCCGGAGTC 
GTCCTGAGTC AGGTCAATTA TTACTATAAA AACAAAGAGG GATTATTCAT TGAGGTCATC 
AGGGCTTTGG CTCAACGCTA TTTGCAGGAA TTAGAGAATA AATTAAGCCA AGGCAAATCG 
GAAGAAGAGA AAACGGCCTG CCTGATCGAG TTTTTTCAGG ACACGCTTCT CAAGAATCCG 
GGATTGTTCA AGCTGCTCTT TGATGTGACC AGCATGGCTC TTTGGTCCGA TACCTTCAGG 
GAACCTCTTC GCCAGCTTTT CGACGACTCT ACAGCATTGA TTGAAAAATA CATTATCAAG 
GATATTGCCC CAAGGCAAAA TAGTGACGGC TATTCGCCGT CAGTATTATC CAGGATTACC 
CTGGGTGCTC TATTTGGTAC CTCCATTCAT ATCATGCTGG CGGAGGAGCA AAAGGATGCT 
GTAGCATCAT TGTCTGCTAT AAAGGTTTTA TTCAGCAATT AG
 
Protein sequence
MYKKKEIGQS EKILNAAVLC ISTKGYASVS LRDIADEAGV VLSQVNYYYK NKEGLFIEVI 
RALAQRYLQE LENKLSQGKS EEEKTACLIE FFQDTLLKNP GLFKLLFDVT SMALWSDTFR 
EPLRQLFDDS TALIEKYIIK DIAPRQNSDG YSPSVLSRIT LGALFGTSIH IMLAEEQKDA 
VASLSAIKVL FSN