| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1979 |
|---|
| Symbol | |
|---|
| ID | 7258948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2132752 |
|---|
| End bp | 2133369 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643561875 |
|---|
| Product | fumarylacetoacetate (FAA) hydrolase |
|---|
| Protein accession | YP_002458455 |
|---|
| Protein GI | 219668020 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.136459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAA ACATTTATTG TGTCGGTCGC AATTATCTGC AGCATGCCAA GGAACTCAAC
AATGCGGTTC CAACTTCCCC GTTTCTTTTC GTTAAGCCCA CTCATGCTCT GGTGGAAGGT
CAGGGGCAGA CCATTGCCAT GCCCAAAGAC CAGGGGAATG TCCATTACGA GGCGGAATTG
GTTGTTCATG TGGGCAAAAA CTATGAACCC GGCATGAAGG CCGAAGCGGT TATTGATAAA
ATAGCTGTAG GGATTGACTT TACTTTAAGA GAGGTTCAGG ATGAGCTGAA GAAAAAAGGA
CTGCCCTGGC TGCTGGCTAA AGGGTTCCCT AACTCAGCGG TACTATCCCG ATGGCTGCCT
TTCGAAGGGC TGGAGGGGAC GGCCGGCCAT GATTTTACCC TTGAGAAGAA TGGACAGGAA
GTGCAAAGAG GAAATATCAA GGAGATGATT TTTGATATTC CCACCATCAT AGAATTCTGT
GCCCAACACT TCGGATTGGC TGAAGGGGAT ATTATTTTCA CCGGAACGCC TGCCGGTGTC
GGTGTAGCCG CTGCTGGAGA CCATTTTGTA CTGAAGTGGA AGGAAGAGCA AGTGGGAGAG
CTGTTCATTG GTGAGTAA
|
|---|
| Protein sequence | MIKNIYCVGR NYLQHAKELN NAVPTSPFLF VKPTHALVEG QGQTIAMPKD QGNVHYEAEL
VVHVGKNYEP GMKAEAVIDK IAVGIDFTLR EVQDELKKKG LPWLLAKGFP NSAVLSRWLP
FEGLEGTAGH DFTLEKNGQE VQRGNIKEMI FDIPTIIEFC AQHFGLAEGD IIFTGTPAGV
GVAAAGDHFV LKWKEEQVGE LFIGE
|
|---|
| |