| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1959 |
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| Symbol | |
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| ID | 7258928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 2108700 |
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| End bp | 2110118 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643561855 |
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| Product | multi antimicrobial extrusion protein MatE |
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| Protein accession | YP_002458435 |
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| Protein GI | 219668000 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.849908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTCCG TCAAAATGAA TCAAGGGAAT AACGTGCTGG GTACGCAGCC GATCCCCGGC
ATGATCTGGA AATTTGCCAT TCCGGCGATC ATTAGTGCTA TGACCAATCA GGTCTATAAT
CTCATTGCTC AGGTCTATAT CGGCTGGAGT GTAGGGGATC TAGGCATAGC GGCCACCAAT
GTGGCTTTTC CCCTGGCGAT CCTGATTACT GCTCTTTCCG CCTTGTTTGG GATGGGGGGC
GCGGCGAAGT TCGGCCTTTA TATGGGTCAG GGCAAGCCGG AGGAAGCAAG CCAAACTATT
GGCAATGCCC TTGTTTTAAT GGTGGTCAGC GGTTTGGCAG TCAGCATCGC CGCAACGGTT
TTCCTGCGGC CCTTGCTGTA TGCCTTTGGG GCCACCGAGG CGATTATGAC GTATGCTATA
CCCTATACCC TGATCACCAA CATCGGTATT CCTTTCGGAA TTCTGGCGGT AGGAGCATCT
TACCTGATCC GGGCCGATGG CAGCCCGTCC TTTTCCATGC TGGTCGTACT ATCAGGGGTG
ATCTTTAATC TGATCGCTGC GCCTGTGTTT CTGTTTGGGT TGGAGATGGG GATTGGGGGA
GTTGCTTTGG CTACGACCCT GGGGCAAATG CTGTCCAGCG CGGTGGCCAT TTACTACCTG
CGCGTAAAAT TCAAGTCTGT TTCTTTAAAG AGAGAAGGTT TCCAGCTGCG GGGTGCTGTG
ATCAAAGGGG TTTGTGCCTT GGGATCTGCC GCATTTTTCA CCCATTTGGC TGCGGCGGCA
GTGCAGATTG TCCAAAGCAA TGCCTTGCGC TATTATGGTG CTCAATCCAT ATACGGAAGC
GAGGCCACCC TGGCCGCGGC GGGAGCGGTG ATCAAGGTCA TGGCTTTCCT CATGTCGGTG
GTGATCGGGA TATCCCTTGG CTGCCAGCCT ATATTTAGTT ATAATTATGG CAGCAAGCGG
TATGACCGGG TCAAAGAAGC TTATAAGCTG GCGGTTTCCT ATGCCACGAT GGTTTCGGTC
ATCGCTTTTT TGTGCATCCA GATCTTCCCC CGCCCTATAT TGAGCATTTT CGGGTCCGGC
AACCCTTTGT TTTATGATTT TGCCGTTCAG TACATGCATA TCTACCTGTT TATGACCTTC
GCCAACGGAA TTCAGCCGGT GACCTCAACC TTCTTTTCTT CGATTGGCAA AGCCAGGATG
GGTTTTTGGA TGTCCCTGGT GCGGCAGGTT ATACTCTTGA TGCCCTTGCT GCTGATTCTG
CCCATCTTTT GGGGAATCAA CGGCGTTTTA TGGGCCGGAC CTCTGGCGGA CGGCATTGCG
GTGGTTTTGG TTATCCTGTT TGCAGCCAGG GAAATGCGCA TCATGACCGG GCTGCAGCTT
AAGCAAGTAC CGGATGCGGG GATTGCCAGG AATAGTTGA
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| Protein sequence | MPSVKMNQGN NVLGTQPIPG MIWKFAIPAI ISAMTNQVYN LIAQVYIGWS VGDLGIAATN
VAFPLAILIT ALSALFGMGG AAKFGLYMGQ GKPEEASQTI GNALVLMVVS GLAVSIAATV
FLRPLLYAFG ATEAIMTYAI PYTLITNIGI PFGILAVGAS YLIRADGSPS FSMLVVLSGV
IFNLIAAPVF LFGLEMGIGG VALATTLGQM LSSAVAIYYL RVKFKSVSLK REGFQLRGAV
IKGVCALGSA AFFTHLAAAA VQIVQSNALR YYGAQSIYGS EATLAAAGAV IKVMAFLMSV
VIGISLGCQP IFSYNYGSKR YDRVKEAYKL AVSYATMVSV IAFLCIQIFP RPILSIFGSG
NPLFYDFAVQ YMHIYLFMTF ANGIQPVTST FFSSIGKARM GFWMSLVRQV ILLMPLLLIL
PIFWGINGVL WAGPLADGIA VVLVILFAAR EMRIMTGLQL KQVPDAGIAR NS
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