Gene Dhaf_1934 details

Gene Information

• Locus tag: Dhaf_1934
• ID: 7258903
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: -
• Start bp: 2070406
• End bp: 2072349
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 643561830
• Product: peptidase M56 BlaR1
• Protein accession: YP_002458410
• Protein GI: 219667975
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component

Plasmid Coverage information

• Num covering plasmid clones: 53
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGGGGA ATATTCTCCT GGTTTCCCTC ACCCTGTCGC CGGTCATTGT CCTGCTGCTC 
ATGATTTCGC CGTGGTTACA TAAAAGGTAC AGCGCCCAAT GGCGTTACCT TGTCTGGCTG 
GTATTAGCCC TCCGCCTGAT CATTCCCTGG CGGTTTGAGC TGCCTGACGC CCCTGTCAAC 
CTACCCGCGC CGCCCCAGCA AACGATTATG TTTCAACAAG ACGATCGGCC CGGCCTGTTC 
ATGGGCAACA GCCACCTGGA GAACAGCCAT AACCCGCCTG GGACTGCCTC CGGTTCTGCC 
CCGGTCTCTG CCTCCGATTC TGCCTCAGCC CCAGTCTCTG CCTCCATTTC TGATTCAGCC 
TCTGATTCAG TTTCAACTTC GTCCCTGGCC CCGGCAGATA ACACCTCTGT GATCACCCTG 
CAGGAACTAT TGCTTATCCT TTGGGCTTTG GGGGCCGTGT CCTTCTTCCT GTTCCATCTA 
ATCAGCTATA CACGGTTCAG GAGAAAAATC AAGCCATATT GCCGCAAGAC TGATTCCGCG 
GTGCCGGACA GCGTTTTCGA AAGTGTCTTG CTTGATCTAA AAATCAAAAG CAGGCCCCAG 
CTTCTCAACT GTTCTAAAAT CGCCAGCCCC ATGCTGACAG GCTTTTTCAA GCCGGCAATC 
TTATTGCCTG ACCTGGAGTA TACCCGGGAG GAATTGTCCC TCGTCCTGCA GCATGAGCTT 
ACCCATTACA AACGGGGCGA TACCTGGTAT AAGCTGCTTT TGCTGGCGGC CAATTCCGTC 
CACTGGTTCA ATCCCCTCAT CTATTTCATG GTCAAGGCGG CCAACCGGGA TCTGGAGTAT 
TCCTGCGATG ATCTGGTGGT CAAAAACAGC GACCTGAGTT TCAGAAAAGA ATATTCCCTT 
ACCATTCTGA AAACAATGCA AAACCAGCAA ACGCCAGTCC TTTCCACAGG TTTTTCCGCA 
AGCGGCGAGA ATGCTAGGAG CAGATTTGCC AATATTTTAG ACGGCCAAAA CAAAAAAAGA 
GGGATTTGGG CCCTGGTTTT GGTGCTGGGT CTGGCCGCTG TCAGCAGCAC CCTGGTCGCT 
TGCAATCAGG TGCAGGAAAG CGTCAATAGC CTGGAAAGTA CCAATATCCA GGAAAGCGCC 
AATAGTCAGG AAAACAACCC AGTCCGGCCG CCGGGCAGTT ATGCCGAAAA TCTATATCAA 
TATAAAGGCA CTGATGTGGA CGATAAGGCG AGAGTAAGTG CCCTTGTCCA GGCACTCCAA 
TTTACGGATT TGCCTGTTCA ATCCATCGAG ATCAAAACGG ACAGCGAACC TTATCGGATT 
ACGGTCAAGT ATCAGGTGGG CAGCCGGGCC GATTATCGCT TTCCCCAGGA TACTCTCACC 
GGCTTAAGCA GAAATGCGGC CGTGCTGTTC AGCTTAATTC CCAAGGTCGA CCATATCTTT 
TTGGATCTTT ATGATGAGTA TGGCTACTTC AGCGGAAGCC CTTATAGCCG GGAGGATTTA 
GATACATATT ACGGCATGGA CTATTTTACA GCCGATCAGG TGAACGAAGC CGCAGACAGC 
CTGGAGTCCT TTACCAATTA CCTGGACCAG GTATCTGCCC TGAAAAACGC GGAAGAATTT 
TACAGTGAGG ATAAGCTGAT CAGGAAGCAA CACGAGGAAA GGATGAAGCA GATCTATGCT 
GTGATCGGGG ATGACTGTGA ACTCGTCGCG ACCAGCTTCA TCACCAACAA CCCCATGAAT 
TTCCAGGGAA CCCTCACCGA GGCCATAACC GTAAGTCCCG AAATCCGGAA ACTGGTGGAG 
CAAAACAATC TGCTCACCCA ATACAAAGAC AAAGAGATAA CCTTCTCAGT GGATATTAGC 
CGCAATTTTA AAATAGACGG CCCCTACACC AATTATTTGT TTGCCTTTGA CGGAGAGAAA 
ATGATTGCTT ATATGGAACT GTAA 

 

Protein sequence

MLGNILLVSL TLSPVIVLLL MISPWLHKRY SAQWRYLVWL VLALRLIIPW RFELPDAPVN 
LPAPPQQTIM FQQDDRPGLF MGNSHLENSH NPPGTASGSA PVSASDSASA PVSASISDSA 
SDSVSTSSLA PADNTSVITL QELLLILWAL GAVSFFLFHL ISYTRFRRKI KPYCRKTDSA 
VPDSVFESVL LDLKIKSRPQ LLNCSKIASP MLTGFFKPAI LLPDLEYTRE ELSLVLQHEL 
THYKRGDTWY KLLLLAANSV HWFNPLIYFM VKAANRDLEY SCDDLVVKNS DLSFRKEYSL 
TILKTMQNQQ TPVLSTGFSA SGENARSRFA NILDGQNKKR GIWALVLVLG LAAVSSTLVA 
CNQVQESVNS LESTNIQESA NSQENNPVRP PGSYAENLYQ YKGTDVDDKA RVSALVQALQ 
FTDLPVQSIE IKTDSEPYRI TVKYQVGSRA DYRFPQDTLT GLSRNAAVLF SLIPKVDHIF 
LDLYDEYGYF SGSPYSREDL DTYYGMDYFT ADQVNEAADS LESFTNYLDQ VSALKNAEEF 
YSEDKLIRKQ HEERMKQIYA VIGDDCELVA TSFITNNPMN FQGTLTEAIT VSPEIRKLVE 
QNNLLTQYKD KEITFSVDIS RNFKIDGPYT NYLFAFDGEK MIAYMEL