Gene Dhaf_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1902 
Symbol 
ID7258871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2038761 
End bp2039975 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content45% 
IMG OID643561799 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002458379 
Protein GI219667944 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCAC AAAGCTCTCA AAATACTGTA ACCAAACCCC GTCTCTGGAC CAGAAATTAT 
CTTTTTACGC TCTTCGCCAA CCAATTCGTC TGTTTAAGTT TCCATATGCT CTTACCTACC
CTGCCGCTTT TTGTCCGGCA CTTGGATGCA ACTGAAGATA TTATTGGATT AATTATGGGC
GTTTTTACGG TTACGGCTCT TGGCATTCGC CCTTTCGCCG GACGGGCAGT GGATACCAAA
GGACGAAAAG TTATTTTTTT ATGGGGTGCG GCAATCATCG TTTCGTCTGT ATTTGCTTAC
AGTCTTTTTC CCGTTATCCC ATTTATCCTT ACTTTTCGCT TGATTCATGG CTTAGGCTTC
GGTCTGTCTA CAACAGCGGT CGGGGCCATG GTCACTGATT TTGTTCCTAA TTCAAGACTG
GGGGAAGGTA TGGGTTATTA CGGACTTGCC ACCGTGATCT CAATGGCTGT TTCTCCTGCC
GTCGGTTTAT TTATTTTTCA TTCCTGGGGT GCCAGCGCCC TTTTTCACGT CTCTGCTTTT
ATAGCGGGCC TGGGCGCTTT TTCAGCAATG TTTGTCAAGT ATCCCCAGAA AATCACACCC
CGACCCAATG AGCCAACATC TTTCTTTTTA GAAAAAAATG CTTATCTGCC TACTGTCATG
ATCTTGCTTG TCATTATCAC CCACGCTTCG ATCATAGCTT TTGTTTCCTT ATACGCCGAC
TCCTTAAATA TATCGAACAT AGGTATATTT TTCACGCTTT ACGCCATTTC CTCTCTGCTT
ACCAGACCGG TTTTCGGATT GTTAAGCGAC AGGAAAGGTT TCAGTTACTC CATAATCCCG
GGAATTATTT TAACCTCCAC AGCGCTGATC GTTTTGTATT TTGCCCGGGA CTTCTCTCAC
TTTATGATTG CAGCCATTTG CTACGGTATA GGCTATGGCG GACTTCTCCC AGCCTTTCAG
ACAATGGCTG TGCGCAAAGC CTCTCCTGCC AGACGCGGCG CAGCTACCAG CACATTCTAT
TGCGGAATGG ATATCGGTTC AGCCTTTGGG ATGATTGCCT GTGGTTTTAT CGCTAAGGCG
ACGGGATACA GCACAATGTT TCTATTATTG GTTATTCCTG TGCTGCTGGC TTTACTATGT
TACCTTTTCC TGGGAAGAGA CAGCTTCAAA AGTCAGCAGC GGCTGCAATC TCTTCTTGGT
AAAATGAAAA GATAA
 
Protein sequence
MSAQSSQNTV TKPRLWTRNY LFTLFANQFV CLSFHMLLPT LPLFVRHLDA TEDIIGLIMG 
VFTVTALGIR PFAGRAVDTK GRKVIFLWGA AIIVSSVFAY SLFPVIPFIL TFRLIHGLGF
GLSTTAVGAM VTDFVPNSRL GEGMGYYGLA TVISMAVSPA VGLFIFHSWG ASALFHVSAF
IAGLGAFSAM FVKYPQKITP RPNEPTSFFL EKNAYLPTVM ILLVIITHAS IIAFVSLYAD
SLNISNIGIF FTLYAISSLL TRPVFGLLSD RKGFSYSIIP GIILTSTALI VLYFARDFSH
FMIAAICYGI GYGGLLPAFQ TMAVRKASPA RRGAATSTFY CGMDIGSAFG MIACGFIAKA
TGYSTMFLLL VIPVLLALLC YLFLGRDSFK SQQRLQSLLG KMKR