Gene Dhaf_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1898 
Symbol 
ID7258867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2032200 
End bp2033546 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content46% 
IMG OID643561795 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002458375 
Protein GI219667940 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGGAT CAGATCAAAG TGCTCCAACC TATTTTGACG ATATGAAGCT CACTTCTTCT 
CATAAGAGAA TGTTATGGTT GGCAGCAATA TGTTACATGT TTGACCAGAT GGACGTAGGT
ACCTTTGCTT ATGCAGCACC GGTATTGGTT AAAACCTGGG GACTTACGAT GGAACAAATT
GCTCAAGTAA ATTCCTACGG TTTTGTGGGA ATGTTTTTGG GAGCTATTTT TGGCGGCTGG
ATTGCGGACA AGATAGGACG AAAGAAAACG ATCATCTTAT GCGTTGCCAT ATTTTCACTC
GGATCCCTGG GAAACGCTCT GGCATTCAAT TTTCATACAT TAGCGATCAC CCGTTTTTTT
ACCGGCCTGG GTGTTATCGG TATGTTGGTC GTGGCGATGG TTTATATAGC GGAAATGATG
CCAAGCGAGC ATAGGGGAAG ATATCAAGCC CTAACCATGG CCTGTGGAAC GATCGCCATC
CCTGTGGGTG CGGCATTTGC CCGGTGGGTT GTTCCGCTGA GTACTGAAAG CTGGCGTTAT
ATTTTCGTCC TGGGCGGCAC CAGTATTTTA TTATTGCCGT TTTGTTTCAT TGTTTTTAAA
GAGTCCCCGC GTTGGCTGGT GTCCAAAGGA CGGATAACGG AAGCAGAAAA AGTTATTCGC
GAAATTACCG GGCGAGAGGT TGATTTAAGT TCGGAAGTCC CGGAGAAAAT TAAAAAAAGC
AGCAGTCTAT CCACCTTAAA ACTAATACTC AGTAAGGAAT ATCTTAAGCG GACCATTATA
CTTGTTATTA TCACGGATGG AGTAGTATTG GGGGCCCAGA TGTTAGGCGG TTTTTATCCT
GCTATCCTGC AGGAATATGC TGGGTTTCAG TTAACATTGG TGTTGTCGAT CATGGCCTTA
TCCTGGTGGG GAATACCTTT TGGCGATCTG TCCGCTTCTT TGGTTTCCGA TAAGGGCGGT
CGCAAGGGGC CTTTGGCTTT ATTTTCAATT ATTAATGGGA TGACCTTTGT CGTATGCGGC
TTTTTTCCAA CACCGGCAGT CATTATCGCA GCGGTATTTT TAAGCAGGGT CTTTGGCGGC
GGCTCGGTGT CTATCCTTTA TACTTATCTG GCTGAATCCT ATCCTACCCA CATCAGAAGC
ACCGCCGTAG GGTTAATTAT GGGACAAGTC CGCATCCTGT CCGCCGTCAT TGTGCTTATC
GTCCCGCCGA TCTTGGCGAC ATATGGCTGG TTGGGGGTTC ACTTGGTCAA TGCAGGAATA
ATAATCGTCA CAGCAATCGT CGCTTTGATA TTTGGACAGA AAACAAGCAA AAGAACCTTG
GAGGAAATAA ACAAGGCGCC GGGATAA
 
Protein sequence
MTGSDQSAPT YFDDMKLTSS HKRMLWLAAI CYMFDQMDVG TFAYAAPVLV KTWGLTMEQI 
AQVNSYGFVG MFLGAIFGGW IADKIGRKKT IILCVAIFSL GSLGNALAFN FHTLAITRFF
TGLGVIGMLV VAMVYIAEMM PSEHRGRYQA LTMACGTIAI PVGAAFARWV VPLSTESWRY
IFVLGGTSIL LLPFCFIVFK ESPRWLVSKG RITEAEKVIR EITGREVDLS SEVPEKIKKS
SSLSTLKLIL SKEYLKRTII LVIITDGVVL GAQMLGGFYP AILQEYAGFQ LTLVLSIMAL
SWWGIPFGDL SASLVSDKGG RKGPLALFSI INGMTFVVCG FFPTPAVIIA AVFLSRVFGG
GSVSILYTYL AESYPTHIRS TAVGLIMGQV RILSAVIVLI VPPILATYGW LGVHLVNAGI
IIVTAIVALI FGQKTSKRTL EEINKAPG