| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1888 |
|---|
| Symbol | |
|---|
| ID | 7258857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2020954 |
|---|
| End bp | 2021877 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643561785 |
|---|
| Product | Polysulphide reductase NrfD |
|---|
| Protein accession | YP_002458365 |
|---|
| Protein GI | 219667930 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAA AACATGAAAC ATGGGGCTGG ATGTTAGCCG TGGACTTCTT TTTTGCCGGC
ATGGGGGCCG CCATGCTGCT CTTTGCCGGG ATCGCCGAAT TATTGACAGG CAGCAATCTC
TCCACGGTGG GGATTCTGGC CGGGGCAGTG TTTATCGCTA TGGGAGCCGG GTTGTTAGTC
CTGGAATTAG GGAGACCTTT CCAGGCTTTG CGGGTATTTA TGAACCCTAA AGCCATCTTA
ACCTTTGGGG CATGGAATAT GTCCATCGCC ATTGTCGCCG GCCTCTTTTT AGGTACGTCC
TGGCTGGAAG CTTTTCCTTG GTTCGGCCTG GTCGGATTTC GTAAAATCCT GGCCATTGTC
TGTATTTTCA CCGGTTTTGT AGTTGCTGCC TATCCGGGGG CACTCCTGGC ACGGCATAAA
GCCCGTCCTT TCTGGAATGG GCCGGGCATG ATGGTGCTCT TTTTAACCTC TTCTTTATTG
ACGGGCCTAT CCGCCTATGT GGTAGTAGGT TGGCTGAGCG GGGCGGCACC TGTGATTTAT
AGTGCTTTCC CGGCCATAGG GGCGGGGCTT TGTGCTTTCC AATTGGTTAT ATGGATCGGC
TATCTTTGGA TTAAGAGTTC GGGAACTACT GAGCGGGAAG TGGCGGCTGT TAAGCGCTGG
ACCAGCGGGA ACTTTGCCAA CCCTTTCCGG ATCGGGTTTA TGTTCCTGGG CACGGTGGTG
CCCTTGGTAC TGTTTCTCAT TCCTAATGGA TTCTCCACAG GAGTGGCCGG GATCCTGGCA
ATCCTGGGCG GAGTAATCAT GCGCAATCTG GTGGTCTATG CCGGTCAGGA TCGCACCTGG
CTGCCCGGAG AAGAAAAATA TCGGTCAAGA CTTCCCCATG GTGATGAAGC TTTCTTACAA
AAGGTTTGGA CAAAACAGAT TTAA
|
|---|
| Protein sequence | MSQKHETWGW MLAVDFFFAG MGAAMLLFAG IAELLTGSNL STVGILAGAV FIAMGAGLLV
LELGRPFQAL RVFMNPKAIL TFGAWNMSIA IVAGLFLGTS WLEAFPWFGL VGFRKILAIV
CIFTGFVVAA YPGALLARHK ARPFWNGPGM MVLFLTSSLL TGLSAYVVVG WLSGAAPVIY
SAFPAIGAGL CAFQLVIWIG YLWIKSSGTT EREVAAVKRW TSGNFANPFR IGFMFLGTVV
PLVLFLIPNG FSTGVAGILA ILGGVIMRNL VVYAGQDRTW LPGEEKYRSR LPHGDEAFLQ
KVWTKQI
|
|---|
| |