Gene Dhaf_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1883 
Symbol 
ID7258852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2014800 
End bp2016065 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content52% 
IMG OID643561780 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002458360 
Protein GI219667925 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTCAGT CAAAAAGTTC ATTACACTAT GGCTGGCTTG TTGTTTTCGG AGGGTTTTTA 
ACCCAGATTA TTCTCATGTG CGGCGTCCAA TTTGTTCCTA TCCTGATGGC GCCGATTAAG
CAGTCCCTGG AATTATCGAA TACATCGGCA GGCACTATCG TATCCGTCTT TGGCCTTTGC
TATGCCGGCT GTTCCTTTAT TTGGGGATAT CTGGCTGACC GGGCAGGGGC GAGAACAGCC
GTATCTCTGG CCGGTCTGGT CTTAGGCATT GCCGTCATAC TTTTTGGACT GCTTGCCGAC
AGCTTCCTCA AAGCAGTGCT GATCATTGCT CTGGTCGGTT TCGGGGCGGC CGGTGTCTAC
AGTGCCACGA TTCCCAAGTT GATTGGTGCC TGGTTCCATC CCAGCAAACG GGGCAGAGCC
ATGAGCACCA TTACGGCAGG GGGCGTGCTG ACGGGAGCAG CTTTCGGAAT TGTGCTGCCC
CAATTGGCTA AGGCCTATGG CTGGCAAACA GCCGCTGTCA TTTTAGGAGT GCTGGCCATT
ATTTGTACTG TTGTAATCTA TTTAGTCGTC AGAAATAAGC CTTCTGAAAA AGGTTTGATT
CCGGTGGGAA CCCCCGCCGA TCAGGTTGTG AAAGCTGCTC CGGCTATGAA AGATGCCGGC
TTCAAAGATG TGCTTAAAAT GAAAGTTACC TGGCATGTGT CCAGTATGTT CATTTTCTGG
CAGGTTGCTT ATATGACAGC CACGGCTTTC GTTGCGGTAT CCTTTGTCAA TGCCGGTTTT
ACGGCTGTAC AAGGTGGTTT GGCTGTAACG ATTTATAACT TATGCCAGCT AATCGGGCAA
CAAATATGGG GGCCCCTGTC CGATCGGTTG GAACGGAAAA CGGTGATCTG CATTGCAGGC
ATCTGGTGGA CTGCAGCAAC CTTGGGTTAC ATGTTTATTT ATGGCAGTAC ATTGAACGCC
ATGTATATCC TCATCGGTGT GATGGGAGTG GGCATGGGCA TGGTTCCGGT CATCCTGGCC
AGTTTCTCGG ATTATTTCCC CACAGAAGTC GGCGGCTCCG GTGCAGGGGT TGTTTCCACC
ATGGGACTGG TGGGCCGTTT CTTTGGCCCC ATGCTTGCCG GTTATGCGGC TGATGCTACG
GGCAGCATTA CAGGCGCCTT TGGCGTAGGA GCTGCAGCCA TGCTGCTGGC ATCCCTGGTC
GCCTTTTCAC TGCCCTCATT GAAAAAGCAG GCGGCGGTAT CTGTCGGTGG AGAAAGTGCC
AAATGA
 
Protein sequence
MTQSKSSLHY GWLVVFGGFL TQIILMCGVQ FVPILMAPIK QSLELSNTSA GTIVSVFGLC 
YAGCSFIWGY LADRAGARTA VSLAGLVLGI AVILFGLLAD SFLKAVLIIA LVGFGAAGVY
SATIPKLIGA WFHPSKRGRA MSTITAGGVL TGAAFGIVLP QLAKAYGWQT AAVILGVLAI
ICTVVIYLVV RNKPSEKGLI PVGTPADQVV KAAPAMKDAG FKDVLKMKVT WHVSSMFIFW
QVAYMTATAF VAVSFVNAGF TAVQGGLAVT IYNLCQLIGQ QIWGPLSDRL ERKTVICIAG
IWWTAATLGY MFIYGSTLNA MYILIGVMGV GMGMVPVILA SFSDYFPTEV GGSGAGVVST
MGLVGRFFGP MLAGYAADAT GSITGAFGVG AAAMLLASLV AFSLPSLKKQ AAVSVGGESA
K