| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1867 |
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| Symbol | |
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| ID | 7258836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 1994020 |
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| End bp | 1996113 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643561764 |
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| Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002458344 |
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| Protein GI | 219667909 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTATC AATCTAACGT AGAAAATGTC AATCCATATA TTGGCCCTAC TGCAGATATA
GACATCTCTG GTCGATGGCG GGGTATTATG CAAAGCAAAA AGGACTTCTT GGAAAAAGGT
ACGGATCCTC GTCTCTCCCC TTACGTCAGA GATGAAATCG CCAATTCCTG GATTCGCTCC
CAAAGCTATA ACCTAACCCC TGAATCAATG GGTACGGCGC CAACGATTAG TTCCCGTGAG
CTAAACTCCA TATTTGAGCA GAATAAAGAG TTGATCGACA TCGCCTTCCC TCTGTTAGAC
AGTTTTAAAC CATTGCTCAC GGAATCCGGT TACATGGTAT CTTTGGTCGA TGGCAGCGGG
ATAGTACTCT ACCGCAACGG TAATACAAAA ATGGTCGATC GCTATGGAAA TACTATTGGC
CCGGGTGTCC TATGGAATGA GGCGACGATT GGAACCTGCG CTCATGTCTT GAGCATTCGT
CACAAAAAAC CTATCTCTTT GTTAGGTCCG GAAAACTTTC CCGCTTATTT CCAGAACGAT
ATCACCTCCA CTGCTCCTTT ATTTGATAGT GACGGAAAAG TTATTGCCGT TTTGATCTTA
CTGCAAAAAC TTGGTGATGA CCCTTGGGAT CTTGATCTCC ACAACCTGCA GTATCTGACT
CTAGGGTGGG TCACATCTCT GGCTATGGAA ATCAAAACTC AGCTCAATCT GAAACTCAGC
AATTCATTGT TCAAGAGTAC GAATACCGCT TTACAGACTG CCATCAAAAT GATGACCGAA
GGGATGGTTA TTGTTAGCCG GGAAGGGCTT ATACAGCATA TAAATTCTCC TGCGGCGCAA
ATATTTAACT GTAATACGAA TGAGGCAATC GGCCGCAATA TCATGGAATT TCTTGTGAAG
AACGACGCAT TGGCAGAAGC TCTGCGGCAA CTTAAAATGA TCCATAATAT TGAAGTCGAA
GTCCTTAATG ACTACGGAAC CCAAGGCTAT ACCTTTTCGA TACAGCCACT CCCCGCCGAT
TCTTCCGGCT CCAGTGGTGG TGTTGTCAAA ATCGTCGATA CCGAAAAAGC CAAAAACATG
GTATCCTCAA GCAGCGGAGC CAAGCTGGAT TTCGATTTTC AAAGCATTAA AGGCGCCAGC
ACCAAGATGC TGCGGACCAA AAGCCTGGCC CAACGCTTCG CCAGATCACC GGCCAATATC
CTATTAATTG GCGAAAGCGG CACTGGAAAA GAACTCTTCG CCCAAGCCAT TCATAATGAA
TATCGGCCTT CAGGGCCCTT TATTGTCCTT AATTGTGCCG CTATTCCCAA GAACCTCATT
GAAAGTGAAT TATTCGGGTA TGACAGCGGT GCCTTTACCG GCGCCAAAAA AAATGGCAGC
CCGGGAAAAA TAGAGCTGGC CGAAGGCGGA ACCCTTTTCC TGGACGAAAT AGGTGATATG
CCTATAGAAA TTCAGGCGGT ATTACTGAGA GTCTTGGAAA ATAAGCAGGT TATGCGCATC
GGCGGCAGTA AATACCGGGC CGTCGACTTC CGCATGGTGG CCGCGACTAA CAAAGACCTG
GCAACCTTAG TCCAAAGCGG TCAGTTCAGA CAAGATTTAT ATTATCGTCT GTCCGTACTC
AGAGTGGATA TTCCGCCCCT TCGCCAGCGG GATAGTGACG TGCTTTCTTT AGCCGAGTTT
TTTATCCAGA AGTACAATTG GCGCAGCAAA CTTCCCAAGC TCAGCCATGA AACCAAAATA
AAGCTCATGG AGTACACTTG GCCGGGCAAT GTTCGCCAGT TAGAGAATGC CATTATCTAT
GCCTTGAATG TGTCAGAAGA TGAATTGATT CTTCCAGAGC ATTTGCCTGA CGAAATTATC
CACAATAAAA ATCATCCTGC CTCCTTATCC TTGAACCCCA TTGAACTCTC CAAAGAAAAC
AACCTGAACG AGGCCGAACT CAGAGATGTG GTCTCCCTGA AGGAAGCGGA AAAAATAGTC
GTACAGAATG CTCTGGCTAA GTCGGGGAAT AATATCTGTA TTGCCGCCGA ATTATTGGGA
TTAAGCAAGT CCACTCTTTA TCGCAAATTA AAGCTCCTCG GCATCGATGA ATAA
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| Protein sequence | MHYQSNVENV NPYIGPTADI DISGRWRGIM QSKKDFLEKG TDPRLSPYVR DEIANSWIRS
QSYNLTPESM GTAPTISSRE LNSIFEQNKE LIDIAFPLLD SFKPLLTESG YMVSLVDGSG
IVLYRNGNTK MVDRYGNTIG PGVLWNEATI GTCAHVLSIR HKKPISLLGP ENFPAYFQND
ITSTAPLFDS DGKVIAVLIL LQKLGDDPWD LDLHNLQYLT LGWVTSLAME IKTQLNLKLS
NSLFKSTNTA LQTAIKMMTE GMVIVSREGL IQHINSPAAQ IFNCNTNEAI GRNIMEFLVK
NDALAEALRQ LKMIHNIEVE VLNDYGTQGY TFSIQPLPAD SSGSSGGVVK IVDTEKAKNM
VSSSSGAKLD FDFQSIKGAS TKMLRTKSLA QRFARSPANI LLIGESGTGK ELFAQAIHNE
YRPSGPFIVL NCAAIPKNLI ESELFGYDSG AFTGAKKNGS PGKIELAEGG TLFLDEIGDM
PIEIQAVLLR VLENKQVMRI GGSKYRAVDF RMVAATNKDL ATLVQSGQFR QDLYYRLSVL
RVDIPPLRQR DSDVLSLAEF FIQKYNWRSK LPKLSHETKI KLMEYTWPGN VRQLENAIIY
ALNVSEDELI LPEHLPDEII HNKNHPASLS LNPIELSKEN NLNEAELRDV VSLKEAEKIV
VQNALAKSGN NICIAAELLG LSKSTLYRKL KLLGIDE
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