| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1860 |
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| Symbol | |
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| ID | 7258829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1986543 |
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| End bp | 1988177 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643561757 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002458337 |
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| Protein GI | 219667902 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.44883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAC AATGGATCAA AACCAAACTG ACAGCAGGGC TGATGGTTAT TTCGCTTCTT
GCCGCAGGTT GCTCTGCACA AACACCGGCG GACTCAGCCC AATCTTCCGG CAACCCTTCA
GCTGCAAAAG ACGAAGTCAT CGTCGCCGTG GGCGGGGAGA AGGAATCGGG CTATGACCCT
TGCACCGGAT GGGGCAGCCA CGGTACTCCG CTTTTTCAAA GTAAGCTGCT GGATACGGAT
ACCAATAACC AGTTGAAAAA TGACCTTGCC ACCGGCTATG AAGTCAGCGA GGACGGCCTT
ACCTGGACTT TCACTGTTCG AGATGATGTC ATTTGCCACG ACGGTGAAAA GCTCACCGCC
AAGGATGTGG CCTTTACTTA CAACAAAACC AAGGAAAACG GCATTTCCAC CATTGATCTG
ACCCTGCTGG ACAAGGCCGA GGCCATTGAT GATACGACGG TCATGTTCCA TATGAAATCC
CCTATGTCCA CCTTTATCTA TCAGACGGCC GCCCTGGGAA TTGTACCGGA GCATGCTTAC
AGCGATCCGG CCGCTTATGC CCAGGCGCCC ATCGGTTCCG GTCCTTATAA ATTCGTACAG
TGGGATAAAG GGCAGCAGCT GATTGTGGAG GCTCATGAGC AATATTACGG CGGGAAGCCC
TCCTTCAAAC GCCTTGTGCT CCTGTTCCTC AGTGACGATG CGGCCTATGC GGCATTGCAG
GCCGGACAAG TCGATGTAGC GAAAATCTCA GAAAATCTGG CGGTCAAGGG AATGCCCGGC
TACAATCTGG TCGACTGCAA AACCAATGAT TTCCGTACAG TTGCTTTGCC TGTGCAAAAG
CCTGGTGAAA CCAGCAAAGA AGGGTACCCC ATCGGCAATG AAGTGACCAG TGATCCCGCC
ATCCGCAAGG CGTTGGCCAA CGGAATCAAC CGTCAGAAGA TTATCGATAC GGTGCTCAAC
GGTTATGGAG ACGTCGCCTA TACCATTGCT CAGGGCCTGC CCTGGGATAA CAAAGAGGTT
ATCCTCACCG ACGGCAATGT GGAAGCTGCC AAGCAGATTC TGGAAAACGC CGGCTGGGTG
GATACGGACG GCGATGGGAT CCGCGAAAAG AATGGCTTGA AAGCGGAGTT CAGTTTGATC
TATGCCTCGG ACGATTCGAC CCGCCAATCG ATTTCCATGG CTTTCAAAGA GCAGGCCAAG
GCCTTTGGCA TTAATGTGAT TACCGAAGGG CTTTCCTCCG CCGACCGTAA CCCCCGCAAG
CATAAGGACG CCTTTATGCT GGGGGGCGGC GATTATAACC CCACTCCTGT ATACAATGCA
CTTTATGGCG CTTATGCGGC CAAAGGCGGC TGGTATAATA TTGTTGCCTA CAAAAATGAA
AAAGTGGACA AGTATCTGGA GGCAGCCGTA GCGGCAACTA CACAGGAAGA AGCCAATCAA
TACTGGCAGA AAGCTCAGTG GGATGGAACC ACGGGAGGTA GTATCCTTGG TGACGCGCCC
TATATTTATA TCGTCAATAT CAGCCATCTG TATTTTGTCC GGGATGGAAT CAGCATCGGG
GAACAGAAGA TCCATCCTCA CGACCACGGC TTTGCGGTAT TGGGCAACAT CATGGATTGG
AGCTCTGTGA AATAA
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| Protein sequence | MKKQWIKTKL TAGLMVISLL AAGCSAQTPA DSAQSSGNPS AAKDEVIVAV GGEKESGYDP
CTGWGSHGTP LFQSKLLDTD TNNQLKNDLA TGYEVSEDGL TWTFTVRDDV ICHDGEKLTA
KDVAFTYNKT KENGISTIDL TLLDKAEAID DTTVMFHMKS PMSTFIYQTA ALGIVPEHAY
SDPAAYAQAP IGSGPYKFVQ WDKGQQLIVE AHEQYYGGKP SFKRLVLLFL SDDAAYAALQ
AGQVDVAKIS ENLAVKGMPG YNLVDCKTND FRTVALPVQK PGETSKEGYP IGNEVTSDPA
IRKALANGIN RQKIIDTVLN GYGDVAYTIA QGLPWDNKEV ILTDGNVEAA KQILENAGWV
DTDGDGIREK NGLKAEFSLI YASDDSTRQS ISMAFKEQAK AFGINVITEG LSSADRNPRK
HKDAFMLGGG DYNPTPVYNA LYGAYAAKGG WYNIVAYKNE KVDKYLEAAV AATTQEEANQ
YWQKAQWDGT TGGSILGDAP YIYIVNISHL YFVRDGISIG EQKIHPHDHG FAVLGNIMDW
SSVK
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