| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1842 |
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| Symbol | |
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| ID | 7258811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 1968828 |
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| End bp | 1970156 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643561739 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_002458319 |
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| Protein GI | 219667884 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000407528 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAAAGG ATATGACACA AGGCAGTCTT GTTAAAGTGT TGGTGAAGTT CAGCCTTCCC
CTGCTTCTTA GCGGCTTGCT GCAACAACTG TATAACTGGT CGGATGCCTT TATGGTTGGT
AATGTCGAAG GTGAGCTCTC GCTTGCGGCC ATTGGCTCAA CCATTCCTAT ATCCAATCTC
ATAATTATGA TGATTACGGG CTTTTCATTG GGCATCTCTA TATTGTCCGG CCATCTATAC
GGAAGTGGAG AGCATTCAGA ACTGAAAAAA GTTCTGTCCT CTTTTACAGT CGTGCTGAGC
GGAGTATTTT TGTTTGTGGT GGTTGGCGGC ATTATATTTA TGAAGCCACT TCTCCAACTT
CTGCAAACGC CTGAAGATAT ATTTTCGATT GCCAACAGCT ACTTATGGAT TATCTTACTT
GGCATGCCCT TCCTTGTCGT CTACAATGTG TATTCTACTG TACTGCGCGG TATGGGAGAC
AGCAAAACAT CATTTTTAGC GATTGTGGTT TCTTCTGTGA TCAATGTCCT TCTTGATATT
TTATTTGTCG TCATACTCCA TTATGGTGTG ATAGGGGCAG CAGTTTCGAC CCTCATCGCA
CAGGTATTAA TGGCTGTATT CATGGTCTGC TACTCTACAA AAAAATATCC TATCATGAGA
TTTCGTATAG AAAAGCATTG CCTGGATGGG AGTATACTAC GCAGAGGGCT TTCTTTAAGT
TTGCCGACTG CAATGCAATC CAGCGTTCAT TCAGTAGGCA ATCTCCTGTT ACAAAATCTC
ATGAATGGGT TTGGGACACA AACCGTAGCC GCAATTACAA CGGCATACAG AGTGGACGGG
GTGATTATGC TGCCGATTAT CAACCTTGGT TACGGAATTT CCACAGTAGT AGCCCAAAAT
ACAGGGGCCG GAAACCATCA ACGTGCAAAA AGAGGGGTCT TTGTTGGTAT GGGCATCATT
GCAGCTGTTG CCATTATTCT TACGGCAGCA GTAATTCCCA CCGGCGGGGC CTTGGTTTCC
CTATTTGGTG TAACAGATGA ATCAGCAGCT ATTGGCAGAA CATTTTTTAA TATCATTGCG
CCGTTCTATC TTGTGTTTGG CATTGCGATA GCAATAAGAA GCTTTCTCGA AGGTGTTGGG
GATGTATTGT TTACCAGTAT CGCAAGCATT GTCGCACTGG GAATAAGAAT TATATTGACT
TATACCTTGG CCGCACCATA CGGAAACAGC ATTATTGCAC TTGCGGAAGG CTTATCATGG
GGAGCATTGC TCTTGATGTG CTTTATGCGG TTTGTGTGGA AGCACAGGAA ATCAGCCTCG
AAGGGTTAG
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| Protein sequence | MAKDMTQGSL VKVLVKFSLP LLLSGLLQQL YNWSDAFMVG NVEGELSLAA IGSTIPISNL
IIMMITGFSL GISILSGHLY GSGEHSELKK VLSSFTVVLS GVFLFVVVGG IIFMKPLLQL
LQTPEDIFSI ANSYLWIILL GMPFLVVYNV YSTVLRGMGD SKTSFLAIVV SSVINVLLDI
LFVVILHYGV IGAAVSTLIA QVLMAVFMVC YSTKKYPIMR FRIEKHCLDG SILRRGLSLS
LPTAMQSSVH SVGNLLLQNL MNGFGTQTVA AITTAYRVDG VIMLPIINLG YGISTVVAQN
TGAGNHQRAK RGVFVGMGII AAVAIILTAA VIPTGGALVS LFGVTDESAA IGRTFFNIIA
PFYLVFGIAI AIRSFLEGVG DVLFTSIASI VALGIRIILT YTLAAPYGNS IIALAEGLSW
GALLLMCFMR FVWKHRKSAS KG
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