Gene Dhaf_1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1811 
Symbol 
ID7258780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1937156 
End bp1938874 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content54% 
IMG OID643561711 
ProductABC transporter related 
Protein accessionYP_002458291 
Protein GI219667856 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00064367 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATCA GACGGTTTCT GCGGTACTAC AGCCCCTACA AGGGACTGTT TCTCCTGGAT 
GTCTCCTGTG CTGTAGCGGC CGCCTTGCTG GAATTGTTTT TTCCTTTTAC GGTCCAACAT
ATTGTCGATA CCCTCCTGCC CAGGGGAGAG TGGAAGCTGA TTTTGGGGGC CTGTATCCTG
CTCGGGTTGA TCTATATCGT GAATACAGTG CTGAAATTTG TGGTAGGGTA TTGGGGAGAA
AAACTGGGGC TCTACATCGA GACGGATATG CGGATTGAGA TTTACACTCA TCTGCAAAAG
CTGTCCTTTC GCTTTTTTGA TAATCATAAG CAGGGCCAAC TGGCCTCCCG GATTACCAAC
GACCTCATGG ATATCGGCAA TATGGCCCAT TATGGACCGG AGCATTTCTT GATCTCCACC
TTTACCCTGG CCGGTGCCAT GGTGATGATG TTTCACGCCA ACTGGCAGCT GGCCCTGCCT
CTGAGCCTGT TTGTGATGAT CCTGCTGGCG ATCAATATGC ATTTTATGCG CCGGCTGGTA
GTGACCAGAA AGCGCATGTT CGGCGCTGTC GGCGGTTTTT TGTCAAGGCT GGAGGATGGT
ATCGGCGGCA TCCGGGTGGT GCAGGCTTTT GCTAACGAAG ACCATCAAAA AAGGCTGTTT
GTGTCGGACA ATCAACGTTT TTGTGAAGCC AAAATTGACG GGTTCAAGAA TGTCGCTCAA
AACGAAGCCG TTACCTATAT GTTTATCAGT CTGCTGCCGG TGCTGGCTCT GTTGGGGGGG
AGCTGGTTTA CTTTGAATGG CAGGATGACC GGCGGTGAAC TGTTCAGCTT CATTCTCATT
GCCAATGTGA TGGTCATGCC CATCCGCATG CTGGCGGCTT TCTCCGTCCG CTTTCCCAAT
GGGATGGCAG GTTTTAAGAA CTTTGTGGAA ATTATCGATA CGGAGCCGGA GATCAAGGAT
GCTCCGGATG CGGTGGAAGT ATCCTCCTTG CGGGGGGATA TCCGCTATGA GCAGGTGAGC
TTTGGTTATC GTGAGGACAG CACGGTCCTG AACACTATCG ATCTGTCTGT CCGGGCCGGT
GAAACGGTGG CTTTCGTAGG GACATCGGGT GCCGGTAAAA CCACCTTATG CAGTCTGCTT
TTGCGCTTCT ATGAAGCGGA TGAAGGGCGC ATCACCATTG ACGGGATGGA TATCCGCAAG
CTTAAGCTGG CTTCTTTAAG GCAGCAGATC GGGGTGGTGC AGCAGGATGT TTTCCTTTTC
TCCGGCAGCA TTGGGGAGAA CATCCGCTTC GGCAAGCTTG GTGCCACAGA AGAAGAACTA
TGGGAAGCGG CCCGCCGGGC CCAGCTGGAC GATTTCATCC GGGAACAGCC TGAGGGCATG
GATACCTTGA TCGGAGAACG GGGGGTAAAG CTTTCCGGAG GACAGAGGCA GCGCATCGCC
ATTGCCCGCA TGTTCCTGAA AAATCCGCCC ATTCTCATCC TGGACGAAGC CACGTCCTCC
CTGGATACCC TGACCGAGTC TTCGATTCTG CAAGCTTTGG CGGAGCTGGC CCAGGGGCGT
ACCACTCTGA TCATTGCCCA CCGGCTGGCG ACCATTCGCC ATGCCGACCG GATCGTGGTC
CTGACGGAGG AGGGTATTGC CGAAGAAGGG GGCCATGAGG AGCTTTTACG GAAAAATGGC
ATCTACAGCA ATTTGCATAG GGCGCAGGTC GGTGCATAG
 
Protein sequence
MMIRRFLRYY SPYKGLFLLD VSCAVAAALL ELFFPFTVQH IVDTLLPRGE WKLILGACIL 
LGLIYIVNTV LKFVVGYWGE KLGLYIETDM RIEIYTHLQK LSFRFFDNHK QGQLASRITN
DLMDIGNMAH YGPEHFLIST FTLAGAMVMM FHANWQLALP LSLFVMILLA INMHFMRRLV
VTRKRMFGAV GGFLSRLEDG IGGIRVVQAF ANEDHQKRLF VSDNQRFCEA KIDGFKNVAQ
NEAVTYMFIS LLPVLALLGG SWFTLNGRMT GGELFSFILI ANVMVMPIRM LAAFSVRFPN
GMAGFKNFVE IIDTEPEIKD APDAVEVSSL RGDIRYEQVS FGYREDSTVL NTIDLSVRAG
ETVAFVGTSG AGKTTLCSLL LRFYEADEGR ITIDGMDIRK LKLASLRQQI GVVQQDVFLF
SGSIGENIRF GKLGATEEEL WEAARRAQLD DFIREQPEGM DTLIGERGVK LSGGQRQRIA
IARMFLKNPP ILILDEATSS LDTLTESSIL QALAELAQGR TTLIIAHRLA TIRHADRIVV
LTEEGIAEEG GHEELLRKNG IYSNLHRAQV GA