| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1790 |
|---|
| Symbol | |
|---|
| ID | 7258759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 1914497 |
|---|
| End bp | 1916533 |
|---|
| Gene Length | 2037 bp |
|---|
| Protein Length | 678 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643561692 |
|---|
| Product | ATPase associated with various cellular activities AAA_5 |
|---|
| Protein accession | YP_002458272 |
|---|
| Protein GI | 219667837 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4548] Nitric oxide reductase activation protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00221847 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA GGTGGATTCT GTCGCCGGCC AGACAGCTGA CAGAGGAAGA GACATCCCTT
GTCTGGCAAA AGCCCGCCAC TCACATCGAA AGTGAGGCTG AGCGCCGCAT CTCTGCAGAA
GTGTACCGGA ATTGGACACG GGGTGAAATG AAACTAACCA CTATCCTTTT GGAAGGAGAT
GCCGGCTCCG GCAAGACACA GCTTGCCAAA GCCCTCTCGG CCAACTTTGG TCTGCCTTAT
ACGAAAGTGA CCTGTTTCGC CGATATGGAC AAATCCGACA TCCTGGGTTC CATCCTGCCC
GTACTGCCGG AGGACGGAAA CAAGGCTGAA GCCGTAACCT ACAACTATTA TCCCTCGGAA
ATTGTCCAGG CTTATGAAAA GGGATGGCTG TTGGAGATTC AGGAACCTAC GGTCATCCGG
GACGCGGCGG TGCTGATGGC TCTTAATTCG GCCTTGGAGC CGGAGGGCAG TATCAATCTG
CCCACCCGGA TTGCCCATCG TCATCCCGAT TTTATCGCAG TCATTACCAC AAACCGCGGC
TACAACGGCT GCCGCCCTCT GAACGAGGCT TTGCGTGACC GTGTGCAGCA CAGTGAGAAG
ATGGATCTGC CTGCTGTGGA AGTCATGATG GAACGAGGGT TGGCTAAAAC CGGCTGCACC
GATCAGGAAC TTCTGCTGAC CTTTGCCCGG GCTATCGTTT TGCTGGATCA AACCGCCAAA
GCCAACGCCA TCAAAGGTGT AGCCGGTATG CGTTCCTATT TTTTCTGGGT GGATGCCGTT
CTGCAGGGTT CAAAAACGGT GGAGGCCCTC TATCACAAGG TGATTTATAA AATCACCACC
GATCCCGATG AAATCCTGAT TCTTGAGCAA GCTCTGGCAA AACAGGGCAT GTTGGCAGCC
CTGGAAAAGG TGTCCCAACA GTCAGGAAGA GCCCAGGGCG AAATCATGGA AATCCACGCC
GAAGGAACTA TGGATGCCCA GTTCTCCGCC CCGGCACCGG ATGATATGCC GGCGGTTGCC
TTGCGCAAGT CAGCCGACAG TGAAGGACAT GCTAATGATG ATGGAGAAAA TACCAGCTCT
ACTCAAAGCT CGGATCAGGG TGAGAACGGC AATCCCATCT ACCACGAGCT GCAGCCAACT
TCCCCTGAGG AATTGGAGCG GCAAAAGCGG GATTTCCGCA AGCATCTGAA CCAGCAAGCC
CGGGAAATGG TCAAAGGATC CTGCCACGAG AAGGTCAATC TGATTGTCCA CCGTCCGGAA
GCAACTCTTG CTCATCGGCG TGAATATGAG CAGATTGCCT CCGGCTTGCT GCCGGTCATC
CGGGAATTGG TGCGCAAAAC TGCTCCCTTG TTGGAACATG AAGTGGCCAC GGAATTCGGG
AAATCCCGTC TTTATGGAAC GAAGTTCCAT GCCGAAAAGC TGGCTTCTCC CGATTTTCGC
TGCTTTTCCC AGAAGTGCCC GCCTAATGAA GAACCTTCTC TGGCGGTAGC ACTGCGCATT
GACGAATCGG CCTCCATGAG TGCCTTTGGA CGGTTAACAG CCGCCAAACA GGCGGCTGTG
GCAGTTTATG AATTTTGTAC AAGCTGCGGC ATACCCACCT TGATTTACGG GGATACGGCA
GATCGCTCAC CTTTGGAGCG GATGTCCCTA TACTCCTATA TTGACTATGA GAACCCATCC
CTCAACGACA AGTATTCCCT CATGGCGATT CAAGGACACA GCAACAACCG GGACGGCATG
GCCCTGCGCA TCCTGAGCGA AAAACTGCTG CAAGCTCCCC AAAAGACCAA GCTGCTCATC
AGCATCAGCG ACGGTCAGCC CAAGGCCCTG CCCGACTACA CCGGCGAGGT TGCCCTAGCC
GATATGAAAG AGGTCATCAG GGACTACAGC CGCCAAGGCA TCGTATTTCT GGCCGCTGCC
ATTGGGCAGG ATAAGGAGAC CCTTTGTGAT ATTTACGGGC CGGAACGCTA TCTGGACATT
ACCGATTTAC GGCAACTGCC GGCCCGGCTG GTTCAAGTCA TTGCCAAATA TCTCTAG
|
|---|
| Protein sequence | MENRWILSPA RQLTEEETSL VWQKPATHIE SEAERRISAE VYRNWTRGEM KLTTILLEGD
AGSGKTQLAK ALSANFGLPY TKVTCFADMD KSDILGSILP VLPEDGNKAE AVTYNYYPSE
IVQAYEKGWL LEIQEPTVIR DAAVLMALNS ALEPEGSINL PTRIAHRHPD FIAVITTNRG
YNGCRPLNEA LRDRVQHSEK MDLPAVEVMM ERGLAKTGCT DQELLLTFAR AIVLLDQTAK
ANAIKGVAGM RSYFFWVDAV LQGSKTVEAL YHKVIYKITT DPDEILILEQ ALAKQGMLAA
LEKVSQQSGR AQGEIMEIHA EGTMDAQFSA PAPDDMPAVA LRKSADSEGH ANDDGENTSS
TQSSDQGENG NPIYHELQPT SPEELERQKR DFRKHLNQQA REMVKGSCHE KVNLIVHRPE
ATLAHRREYE QIASGLLPVI RELVRKTAPL LEHEVATEFG KSRLYGTKFH AEKLASPDFR
CFSQKCPPNE EPSLAVALRI DESASMSAFG RLTAAKQAAV AVYEFCTSCG IPTLIYGDTA
DRSPLERMSL YSYIDYENPS LNDKYSLMAI QGHSNNRDGM ALRILSEKLL QAPQKTKLLI
SISDGQPKAL PDYTGEVALA DMKEVIRDYS RQGIVFLAAA IGQDKETLCD IYGPERYLDI
TDLRQLPARL VQVIAKYL
|
|---|
| |