Gene Dhaf_1761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1761 
Symbol 
ID7258730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1890345 
End bp1891619 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content48% 
IMG OID643561663 
Productprotein of unknown function DUF214 
Protein accessionYP_002458243 
Protein GI219667808 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACATGG TTGAAAATAT CTTACTGGCC TTGGCCGCCT TAAAGGCCAA TAAAATGCGG 
GCAATCTTAA CCATGCTGGG GATCATTATC GGCATCGCCT CAGTCATCGC CATAGTAACC
GTCGGCAACT CCCTGACGGC TTCGATCACA TCCACGATGG AAGAGATGGG GGCTAATTCC
ATTGTGGTCA GTGTCAGGGA ACGCGGCGGG GATGAGTTTG GCGGCGGACC TCGTGGCCCC
AACCAGGCTG CGGCTACCCC GGAAGAAAGC GATCTTTTCT CAGAGGACAC GATTGAAGCC
TTTGCCTCAC GATTCGGGGA CAGAGTTGAA GCCATCAGTT TATCTCAAGG TGTGGGCAGT
GCGAAAGCTC AGGACGGCAG GCTCTATGCC AATATCAGTG TAACCGGAGT TAATGATGGC
TATGAAAAGG CCAATAATCT AGATCTTCTC TTCGGCCGGT TTATAACGGA GAAAGATGTG
AAGTCCGTAA AAAAAGTTGC CGTGGTATCG GATAAATTGG TGAATAACAT GTTTTCAGCC
GGAGTAGATC CCTTAGGCCA GGAAATAAAA ATCTATTCTT CAGACGACAT CGAAGTCTAC
ACCATTATTG GGGTTTACCA ATATGAAGCT TCGGCCTTTG GACCTGACTC TTCTTCAGAG
CGGGATACAA GGACTAACTT TTATATACCG GTCAGTTTAG CCAAACAGGA CAGCACCACC
AAAAACTATC AGTCCTTTAC CATCGTTACC AAAACCGGTG TGAATGCCGC CACCTTTACC
GAAGACATCA AAAGCTACTT CACCAAGGTT TACGAAAAAA ACACGAAATG GGAAGTGGGC
GTCATGAACA TGGAGAGTAC GATTTCCAGT ATGACCTCCA TGCTGAGCAC GGTTTCCATC
GCCATTTCCA TCATCGCTGC CATATCCTTG TTAGTCGGTG GTATCGGTGT GATGAATATT
ATGCTGGTAT CGGTTACAGA ACGCACCCGT GAGATCGGGA CAAGGAAAGC CCTGGGGGCC
AGGAATTCTT ATATCAAGAT GCAATTCATC GTGGAGTCGG TGATTATCTG TGTGATAGGA
GGTATCATCG GGATTATCCT GGGCCTTATC CTGGGGATGC TCGGCTCGAC CCTTTTAGGC
TATCCGGCCA GCACCTCCAT CGGCATCATC ATCTTAAGCG TTTCGGTAAC CATGGTGATT
GGCGTATTTT TCGGATACTA TCCAGCCAAT AAAGCTGCCA AACTTGATCC CATCGAAGCT
CTTCGCTATG AATAA
 
Protein sequence
MNMVENILLA LAALKANKMR AILTMLGIII GIASVIAIVT VGNSLTASIT STMEEMGANS 
IVVSVRERGG DEFGGGPRGP NQAAATPEES DLFSEDTIEA FASRFGDRVE AISLSQGVGS
AKAQDGRLYA NISVTGVNDG YEKANNLDLL FGRFITEKDV KSVKKVAVVS DKLVNNMFSA
GVDPLGQEIK IYSSDDIEVY TIIGVYQYEA SAFGPDSSSE RDTRTNFYIP VSLAKQDSTT
KNYQSFTIVT KTGVNAATFT EDIKSYFTKV YEKNTKWEVG VMNMESTISS MTSMLSTVSI
AISIIAAISL LVGGIGVMNI MLVSVTERTR EIGTRKALGA RNSYIKMQFI VESVIICVIG
GIIGIILGLI LGMLGSTLLG YPASTSIGII ILSVSVTMVI GVFFGYYPAN KAAKLDPIEA
LRYE