Gene Dhaf_1757 details

Gene Information

• Locus tag: Dhaf_1757
• ID: 7258726
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 1885670
• End bp: 1887514
• Gene Length: 1845 bp
• Protein Length: 614 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 643561659
• Product: PAS/PAC sensor signal transduction histidine kinase
• Protein accession: YP_002458239
• Protein GI: 219667804
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG5002] Signal transduction histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGTCAA TCTTTGCAAA GGCTGCAGCC ATCACTAGAG GCTGCTACAG CAGGAATGGA 
AGTACCGTGA AGAAGAAGAG CTCGTTTCTC AAGCGCATCC TAATACTAAT GATCACCACA 
ATTGCCTTGT ATAGCTTCCT GATCACCATC TTTTTTTGGT TTACAACCAA TGATATGTTT 
AGAGAATTGC AAACCCGCGA ACTTAAACCC AGTGCGGAAG CCATCGCTGA TTTGGTGTTG 
AAATATCAAC AGGGGACTAT GAGCAAAGAT GACCTTGAGG AACATTTTAA TCTTAACAAA 
GGGATATGGA ACTTTGTTGT TCATGTTTAT GATGGGCAGG GCAACCTGAT TATTAAAAAT 
GAAGAAATTT TAACCACTTT GTTCCGGGGA AAAAATGCGG AGATTGGGCT GAACCTTAAC 
CCTGTTTTGA AAGAATATTT CAGCTCCGTT TTATCCGGGG ATAGTGTGGT TGCTAACAAG 
GGGCCCTTTT TGATAGTAGG CCAGCCCATT GCGCATAACG ACAGCATTGT TGGCATGGTT 
TTCCTGGGCA AGCCGCAGAT AGAGATTTTT ACTGCCCTAT CCGGACTTAA CCGCTCCATC 
TGGATAAGCG CCTTAGGTGT TCTTTTGCTG TTATCTTTTC CCCTCTATCG AGCCGCACGG 
TATATTGCTC ATCCATTAAA ACAAATGCGT GATGTAGCCA TTAGTATGGC CAACGGCAAT 
CTTAAGGAAC AGGCCAATGA AAAATATGGG GGAGAGATCG GCGAACTGGC CCACTCCCTT 
AACTATTTAT CCGCAAGGTT ATCTGAGACC ATTTCCGCAT TGGAATTGGA AAGAAACCGG 
CTGAAACAAA CCATTGATGG TCTCGCCGAA GGAATTGTGG CCATAGATAA TGAGGGGAAT 
TTTACTCATA TTAACCCGTC GATCCAGAGG ATTTTTGGTA AAAACCCAGG CGAGGGACGG 
ATGAGTTTAA TACCCAGTCA AGAACTATGG GAAGATTTTG ATGCTGTTCT CGCCCAAGGA 
TATACCATCG TCCGCAGTTT GCAGTGGAAG CAGATGCTTT TAAGAGTCAC AATTTGTCCG 
CTGGAGGATG AAACCCATCA TATTGCCGGT GTCGTTGGTT TATTCCGCGA TATAACAGAA 
TCAGAACGGT TGGAGCAAAC CAGGCGCGAG TATGTTGCCA ATGTTTCTCA TGAACTGCGC 
ACACCCGTAT CGGCCCTCAG GGCTTTATCG GAAACACTGG CCGACGGCAT GGTAAGTGAT 
GAGGAGACCA AAAACCGCTA TTACAATCAT ATGCTCCATG AAACCATGCG GCTTACACGA 
CTGATCAACG ATCTGCTTAC CCTGTCCCGC CTGCAGTCTC ACACAGAGCA GGTGCACACC 
GAAGCATTCC TGATCAACGA GGTAACGGGC AGTGTAGCTG AACGGTATAA ACCGCTGGCC 
CAGAAAAAAG GCTTAAGATT TGATTATTCA CCCTTGGTCC ATGATCTGAA AGTCATGAGC 
AACATGGATT TAGTTGAACA AGTTCTGATC ATTCTTCTGG ATAATGCCAT AAAGTATACT 
CAATCAGGCG GCAGGATTTC CTTAGGCACT GTCCTCGATA AAGATAGGGT TAAAGTGTCT 
GTAGCGGATA CGGGAATGGG GATTGCTCCG GAAGACCTCC CCCATATCTT TGAAAGGTTT 
TACAAAGCCG ATAAGGCCCA CTCCACGCAG GGAACAGGGT TGGGGCTGGC CATCGCCTTT 
GAAATCAGTC AGCGTTTAGG TGAAGAAATT TATGTGGAAA GCCATTTGAA TGAAGGCAGT 
ACCTTTACGT TCACGTTATC CTGCAGCGGT GCTTCGGCCT CCTGA 

 

Protein sequence

MQSIFAKAAA ITRGCYSRNG STVKKKSSFL KRILILMITT IALYSFLITI FFWFTTNDMF 
RELQTRELKP SAEAIADLVL KYQQGTMSKD DLEEHFNLNK GIWNFVVHVY DGQGNLIIKN 
EEILTTLFRG KNAEIGLNLN PVLKEYFSSV LSGDSVVANK GPFLIVGQPI AHNDSIVGMV 
FLGKPQIEIF TALSGLNRSI WISALGVLLL LSFPLYRAAR YIAHPLKQMR DVAISMANGN 
LKEQANEKYG GEIGELAHSL NYLSARLSET ISALELERNR LKQTIDGLAE GIVAIDNEGN 
FTHINPSIQR IFGKNPGEGR MSLIPSQELW EDFDAVLAQG YTIVRSLQWK QMLLRVTICP 
LEDETHHIAG VVGLFRDITE SERLEQTRRE YVANVSHELR TPVSALRALS ETLADGMVSD 
EETKNRYYNH MLHETMRLTR LINDLLTLSR LQSHTEQVHT EAFLINEVTG SVAERYKPLA 
QKKGLRFDYS PLVHDLKVMS NMDLVEQVLI ILLDNAIKYT QSGGRISLGT VLDKDRVKVS 
VADTGMGIAP EDLPHIFERF YKADKAHSTQ GTGLGLAIAF EISQRLGEEI YVESHLNEGS 
TFTFTLSCSG ASAS