| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1751 |
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| Symbol | |
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| ID | 7258720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1878838 |
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| End bp | 1880007 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643561653 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002458233 |
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| Protein GI | 219667798 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000123921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCTTT ACAACATCAA TATGGCGACG ATTTTAGTGG TTCTCGTTTT AGGCCATCTT
TTAACAGGAG CGCTCATTAT GGCCTATATA GGGCCGCAAG ACCGAAGCAG GGCGGTCAAT
ATGTTTCTAT TGGCGAAATT TCTCCAGCCA ATGGCCTGGC TTATTCTCGG CCTGAGAGGT
GCTGTGCCCA GCATGGCTTT GGTAGCGGTG GGCAACTCAG CCTTGTTTAC GGGAGCGGCT
TTGGAGCTGA TCGCCCTGAT GATGTTAAAA AATAACTATA CCGAAAAAGT AAGACGGGCC
TATAACGCCC TGCTGATTGG GTGTATCGTT GTCTTTATTG GGGTGACAGC ATACGGCTTT
CAGGAGAACG TCAGGATCAC CTTTGCCTCC TCGATCACAG CCATATTGAT GGTATATCCC
GTGTATAAGC TGTTTAGAGA TAAGAAAGCT TCCCGGCTGC AGAAAGGAAT TGCCGTCCTT
TACAGTATTA CCATACTGTT TCTGCTCTTC AGGGCGGTTG CGGCTTTAAC GACAGACATG
GATATGAATT TGGCCTCGAC AAGCATTTTC AATACCTGGC TGTTTTTACT CCTCTACATC
GTAATGCTGG TGGGAAGCAC CGGGTTTATT CTCTTGGACA AAGAAAAACA GGACGAGGAA
CTGCTGAAAG CGGCGTCCTT TGACGGCTTA ACCAATATAT TGAACCGCAA AACCTTTATC
GAGCGCTCCA ATGCGGTTAT TTCATTGTAC TTGAGAGAGC AAGAGCAAAT CGCTTTCTTG
CTGATTGATA TTGACGACTT TAAAAAAATC AACGATAAGT ACGGGCACTT TGTCGGGGAT
GCCGTACTGC AGGATTTTGC CGATACCCTT AGAAAACAAT TGCGGGATTA TGACTTGTTC
GGCAGATATG GGGGAGAGGA ATTTGCCATA TTGCTTCCCG GGACAGATGA GAAACAGGTT
AAAGAAGTTG CGGAGCGGCT GCGGGGGACC ATCGCGAACT CCTCTGTTGA CACCGGCCTT
AAAATAAACT ATACCATAAG CGTGGGGTAC TGCAGCATCA CTCCGGATCA GGAAACAACG
ATTGATATGC TTTATAAACT TTGCGATCAG GCCCTTTATA TGGCCAAAGC CCATGGGAAA
AACTGCTGCA GGAAGGCGGC TGAGGTATAA
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| Protein sequence | MILYNINMAT ILVVLVLGHL LTGALIMAYI GPQDRSRAVN MFLLAKFLQP MAWLILGLRG
AVPSMALVAV GNSALFTGAA LELIALMMLK NNYTEKVRRA YNALLIGCIV VFIGVTAYGF
QENVRITFAS SITAILMVYP VYKLFRDKKA SRLQKGIAVL YSITILFLLF RAVAALTTDM
DMNLASTSIF NTWLFLLLYI VMLVGSTGFI LLDKEKQDEE LLKAASFDGL TNILNRKTFI
ERSNAVISLY LREQEQIAFL LIDIDDFKKI NDKYGHFVGD AVLQDFADTL RKQLRDYDLF
GRYGGEEFAI LLPGTDEKQV KEVAERLRGT IANSSVDTGL KINYTISVGY CSITPDQETT
IDMLYKLCDQ ALYMAKAHGK NCCRKAAEV
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