| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1749 |
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| Symbol | |
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| ID | 7258718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1877264 |
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| End bp | 1878397 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643561651 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002458231 |
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| Protein GI | 219667796 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000000958902 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGAGAGCA ACTTTGAGCT GGTAAAAATA ACGAAAACCA TAACCGATAT GCTGGATGAC
CATATCCTGG TTTGCAATAC TGAAGGGAAG ATTGTGTTTG CCAATCGGAT CATGCAGGCC
CGCTTAGGCT ATCAAGAAGC AGAGTTAGAA CATAAGAGTT TTTGGGATAT CGTTGAAGAC
AGGCATGGTG ATAAGGCCAA AGCCTTTATA GCCAGTGCGG CGGAGCCATC CGGCTGGGAG
AGGTTTTTGT TGAAAGGCCA GCAAGGGATT GTGAGCCTTC ACCTCAAATT TCTGCTGAAG
GAAGAGTATA TCTATATTTA TGGCAATGAA AAATATATTG AGTATGAGAG AATACGAAAA
AAGCTGGATG TTGAAATAGC GAATGCGGTT AAGATTCATA AACGCACCCT GCCGGAGCGC
CTTCCTGATA CGGAGCAGAT CTCTTTTGCT TCCTTATATA TTCCGGCTGA AGAATTGGGC
GGAGATATCT TCGATGCTTT TAGAGTCGAT CACGGGCTGC TCAATGATTA TTTTGAACAA
TATGTATGTT ACATAGCCGA TGTTTCCGGA CATGGCCTGG ACAGCGCGAT GCTGGCCATT
TTTGTCAAAG ACACGATCAA TAGTTTTTTC CGACTGAAGC ATATCCCGGG ACAGATGCTG
TCTCCCCAGG AAATCGTGGA TTTTTTTGTT GAGCACTATC TAAAAGAGGG GTATCCCGAA
GAATACCTGG TTTGCCTGTT CATGGTTGTT TTTGATTTAA AGACCAAAGA ATTGACTTAT
TGCAATGCGG GGTTTCACAT TTGCCCTCTA TTAATCAAGG ATGAAGAGCA TATCATAGAG
CTGAATAATG GGGGACTGCC TGTTTCCACA GGTATACACC CTGACCTGTT AAAGTATGGG
GATTCCTGCC ACCATTTATC GCCAAACATG ACGTTGTTTA TTATGTCCGA TGGATTGCCT
GAGCAGCAGT CTGAGAATGG GCTCTATCAG GAGCGCTTAA AAAAGCTGAT CACAGAAATT
TATTGCTTGA AGCCCACTCA GATAGTGGAA GAAATTCATA AAGATTTTAC CAGTTTTTTA
AGCTATGAAA AAATCAGGGA TGATATCACA TTGGTTGCAG TAAAACTGAG CTAA
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| Protein sequence | MESNFELVKI TKTITDMLDD HILVCNTEGK IVFANRIMQA RLGYQEAELE HKSFWDIVED
RHGDKAKAFI ASAAEPSGWE RFLLKGQQGI VSLHLKFLLK EEYIYIYGNE KYIEYERIRK
KLDVEIANAV KIHKRTLPER LPDTEQISFA SLYIPAEELG GDIFDAFRVD HGLLNDYFEQ
YVCYIADVSG HGLDSAMLAI FVKDTINSFF RLKHIPGQML SPQEIVDFFV EHYLKEGYPE
EYLVCLFMVV FDLKTKELTY CNAGFHICPL LIKDEEHIIE LNNGGLPVST GIHPDLLKYG
DSCHHLSPNM TLFIMSDGLP EQQSENGLYQ ERLKKLITEI YCLKPTQIVE EIHKDFTSFL
SYEKIRDDIT LVAVKLS
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