Gene Dhaf_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1742 
Symbol 
ID7258711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1870856 
End bp1871800 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content53% 
IMG OID643561644 
ProductABC transporter related 
Protein accessionYP_002458224 
Protein GI219667789 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000920436 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGTAA TCGAGGTGAA GAATCTGGTT AAGCAGTACA AAAACGCCAA AACCCCGTCT 
GTGGATGGAG TCAGCTTTAC GGTGAACAAG GGGGAGTTCT TTGCCTTTCT CGGCCCCAAT
GGTGCAGGCA AAACCACCAC GATCTCTATT CTCACCACCA CCCTTGCCAA GACTTCCGGA
GAAGTGAACA TTGCCGGGTT TGATGTAGAA AAAGAAGCGC GGCAGGTGCG GGAAAAAATA
GGCATCATCT TTCAGAAGCC CAGCCTGGAC GTCCAGCTTA CCGCGGAACA GAATATCCGC
TTCCACGCCG CACTCTATGG CATGTGCACC TATCAACCCA GCTTTAAACT CATGCCGGCC
GCCTATCGCA AGCGGGTGTT GGATTTAGCT GAAATTGTGG GCATTGAGGA TGCCTTGTTC
AAGCCGGTTA AAAACCTTTC GGGCGGAATG CAGCGCAAGC TGGAAATCAT CCGCAGCCTG
ATGCACACGC CGGAGGTGCT GTTCCTTGAC GAACCGACCC AGGGACTGGA TGCGGTAAGC
CGCAGGGGGC TGTGGGATTA CATCGATAGG GTGCGCCAGG AATACGGCAC CACGGTGTTC
CTCACCACCC ACTATATTGA CGAAGCGGAA AAGGTGGATA AAGTCTGTAT TATCAACCAC
GGCAAAATCG CGGCTTGCCA GTCCCCGACG GAACTGAAGC AAAGCCTGCT CCGCCAGGAG
CTGATTGTGG ACGCTGCCGA CAGGAACGCT TTAACCGCTG AACTGTCCGG GTTAAATCTG
TCCTATAAAC TCAACGGACA GATTAGTGTC CCCCTCCAGG GGCAAAGGGC TCAGGAACTG
ATCGCCAGGC TGCAAACACC GCTGACGGTA CTCAGAATCC ATGAGCCGTC CTTAGAGGAT
GCCTATATCG AATTCTTAAA CAAATCAGGA GGTGAAGCAC AATGA
 
Protein sequence
MGVIEVKNLV KQYKNAKTPS VDGVSFTVNK GEFFAFLGPN GAGKTTTISI LTTTLAKTSG 
EVNIAGFDVE KEARQVREKI GIIFQKPSLD VQLTAEQNIR FHAALYGMCT YQPSFKLMPA
AYRKRVLDLA EIVGIEDALF KPVKNLSGGM QRKLEIIRSL MHTPEVLFLD EPTQGLDAVS
RRGLWDYIDR VRQEYGTTVF LTTHYIDEAE KVDKVCIINH GKIAACQSPT ELKQSLLRQE
LIVDAADRNA LTAELSGLNL SYKLNGQISV PLQGQRAQEL IARLQTPLTV LRIHEPSLED
AYIEFLNKSG GEAQ