| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1736 |
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| Symbol | |
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| ID | 7258705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1865234 |
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| End bp | 1866754 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643561638 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_002458218 |
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| Protein GI | 219667783 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00814809 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTG CAAGCAAAGT AGATAAAACG ATAGTATGGA GTTCACTGAT CGTTTCGTCA
GCCTTTATCA TCGCTACACT GGTGACGCCA TCGGGTGTTT CCCAAATCCT CAATGCTATT
TTTTCTTTTT TCACTAAGAA TCTGGGTTGG GCCTATATGT TATCGGCGGC TGCCTTTGTT
GCCTTTGGTA TTGGTCTGGC CGTAAGCAAA TACGGCCATA TCAAGCTCGG TAAGGATGAT
GAAGAGCCGG AGTACAGCCG GGGCAGCTGG TTTGCCATGC TGTTTGCTAC AGGCATGGGC
GTCGGTCTGG TGTTCTGGGG CGCTGCCGAG CCGATTATGC ATTTTGACAC CTCTCCTTTC
GCAGCCAACA GAACGCCGGA AGCAGCCAGC ATTGCCATGC GTACGGTGTT TTTCCACTGG
GGACTGCATC CCTGGGCTTT GTATGGAGTG GTGGCAATGT CCCTGGCTTA TTTTCAATTC
CGCAAAGGCC TGCCCGGCCT AATCAGCTCC ACATTTTACC CGTTAATCGG AGAGAAGGGC
ATCAGAGGCC CGATCGGCAA AATCATTGAT GTCATTGCCG TTGTCGTAAC GCTATTCGGA
GTCGCCACAT CCCTCGGACT GGGCACCCAA CAGCTTACCA CCGGAATGAA TTACGTCTAT
GGTCTGCCGA ACACCACCTC TATGGCCCTG GTAATAATCG CGATCATCAC CATTTTGTTT
ACCATCGCGG CTGCCAGCGG AATTGATAAA GGCATTAAAT TCGTCAGCAA TACCAATATG
GTTCTTGCCT TCCTGCTGAT GCTTTTCCTC CTGATCGTCG GACCGACAAA ATATATCCTG
AATACTTTTT TTGAATCGAT GGGTAATTAT CTGCAAAATT TTGTGTCCCT GAGCTTTTTT
CTGGATACCC AGGGAGCAGT GGCCGAACGT ACAGGTTATG ATTGGATTGG CTCCTGGTCG
GTTTTTTACT GGGCCTGGTG GATCACCTGG GCACCCTTTG TGGGAAGCTT TATTGCCCGG
ATTTCCAGAG GGAGAACCAT TCGTGAATTT GTACTGGGTA TCCTTGTTGC GCCCCCCTTG
TTAAGTGCCA TATGGTTCAG CATCGTCGGG GGCAGCGCTC TTCACATCGA GTTGTTTGGC
AGTGGAGGAA TCAGCGCCGC CGTTGCCGAA GATGTCTCCA GCGGTATTTT TGCCATGCTC
AGTCATTTCC CTTTAAGCGG TCCCGTGGCT TTGCTGACAA TGATCTTATT GGCGATATTC
TTCATCACTT CGGCTGAGTC CGCGACCTTC GTTGTCGGCA TGTTTACTTC CGGCGGCGAT
CTTAATCCGG ATGCCAGGCT GAAAATCGTC TGGGGTGTTG TGGAGGGAGC TATAGCTGCC
ATGCTCCTCG TAGCCGGCGG GCTTTCCGCA GTTCAGACAG TTGCCTTTAT CTTTAGTTTT
CCGTTCATGC TTATTATGAT CCTGATGGTA GTGAGCATGG TTAAGGCCTT GGGCGAGGGT
GAGAAGAAGC CGCTGCAGTG A
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| Protein sequence | MKSASKVDKT IVWSSLIVSS AFIIATLVTP SGVSQILNAI FSFFTKNLGW AYMLSAAAFV
AFGIGLAVSK YGHIKLGKDD EEPEYSRGSW FAMLFATGMG VGLVFWGAAE PIMHFDTSPF
AANRTPEAAS IAMRTVFFHW GLHPWALYGV VAMSLAYFQF RKGLPGLISS TFYPLIGEKG
IRGPIGKIID VIAVVVTLFG VATSLGLGTQ QLTTGMNYVY GLPNTTSMAL VIIAIITILF
TIAAASGIDK GIKFVSNTNM VLAFLLMLFL LIVGPTKYIL NTFFESMGNY LQNFVSLSFF
LDTQGAVAER TGYDWIGSWS VFYWAWWITW APFVGSFIAR ISRGRTIREF VLGILVAPPL
LSAIWFSIVG GSALHIELFG SGGISAAVAE DVSSGIFAML SHFPLSGPVA LLTMILLAIF
FITSAESATF VVGMFTSGGD LNPDARLKIV WGVVEGAIAA MLLVAGGLSA VQTVAFIFSF
PFMLIMILMV VSMVKALGEG EKKPLQ
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