Gene Dhaf_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1720 
Symbol 
ID7258689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1844227 
End bp1844955 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content54% 
IMG OID643561622 
ProductABC transporter related 
Protein accessionYP_002458202 
Protein GI219667767 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCCAGC TTAAAGGAAT TAAGAAAATC TATACAACCG GGGATATTCA GGTCCACGCA 
TTGCGGGGGG TGGACTTTCA CATCAAGGCC GGAGAGTTCG TATCCATCAT GGGGCCCTCC
GGTTCAGGGA AATCCACAAC GATGAATGTC CTGGGCTGTC TGGATATTCC CACAGAAGGA
GAATATCTTC TCGATGGTGT GGATGTGGCC AAGGCCACAG CCAAAGAATT AGCCAAAATC
CGCAACCGCA AGATCGGTTT TGTCTTTCAG GGATTTAATC TTTTACCGCG CACCACGGCT
TTGGAGAATG TGGAGCTGCC CATGCTGTAT GCCGGGATCA ATGCTAAAGA GCGTCATCAA
AGGGCGGTGG AAGCATTAGA GTCGGTGGGT TTGGGAGACA GGGTATACCA CCGGCCCAAA
GAGCTGTCGG GAGGCCAGCA GCAGCGGGTA GCGATTGCCC GGTCTCTGGT GTGCCGGCCG
GCCATTATTT TAGCCGACGA ACCCACCGGA AACCTGGACA GCAAGGCCAG CGAGGAAGTG
ATGGCCATCT TTCAGCGTCT GCACCGGGAA GGGAATACCA TTGTGCTGGT TACCCATGAG
CCGGATATAG CGGAGTATAC CCAACGCATT ATCCGCTTCC GGGATGGGGA GATCGAGAAA
GACGAAGCCG TCGAAAACTC CCGCGTGGCT AATGCTCCCC TTGACCGGGA GAAAGGAGGA
GCGGTGTGA
 
Protein sequence
MIQLKGIKKI YTTGDIQVHA LRGVDFHIKA GEFVSIMGPS GSGKSTTMNV LGCLDIPTEG 
EYLLDGVDVA KATAKELAKI RNRKIGFVFQ GFNLLPRTTA LENVELPMLY AGINAKERHQ
RAVEALESVG LGDRVYHRPK ELSGGQQQRV AIARSLVCRP AIILADEPTG NLDSKASEEV
MAIFQRLHRE GNTIVLVTHE PDIAEYTQRI IRFRDGEIEK DEAVENSRVA NAPLDREKGG
AV