| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1719 |
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| Symbol | |
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| ID | 7258688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1842661 |
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| End bp | 1844214 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643561621 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002458201 |
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| Protein GI | 219667766 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA AGTTGGTGAT TACTCTGGTC CTTGGAGTTG TTGTATTGGG CGGAGGGGGT
TTCTGGGCTT ACCAGCATTT TCAGGAGAAA CCCCAACAAA CGTCTTTAAT GACAACCACA
GTTAAGAAGG GTGATATTAT CCAGGAGATT ACGGCTACAG GCACTGTGAT GTATCCTGAA
GAGGTTCCCC TGGCCTTCGA ACAAAACGGC AAGGTGCGGG AAATCTATGT AAAAGTCGGC
GATGCGGTAA CAGCAGGTCA GGCTCTGGCC CAGATGGATA CGGAAACCTT GCAGCAGGAG
GTGACCGAGA GTATGGCCAG TCTGAAAGAA GCTGAGCTGA ACTGGCAGCA ACAGAAAGTG
GAAGCAGAAG GGACGCTGGT TAAAGCCAGG CAAGCGCTCC GGACAGCGGA GCAAAACGCT
GATCCGGCTT ATTTGCAGAA TCAGCTGGCC ATTGCGGAAC AAAGTCTGCT GATTGCCGGC
AATAATCTGG CCGCCAGCCA ACTAAGCGGA GATGAATCGA GTATCTTACA GGCCAAAACC
GCCCTCACTC AGGCCCAGTC TGACCTGATC AATGTTCAAA ATACATATAA TGGCGGAGCG
GAACAGGCTG TGGACTCAGC AAAAGCCGAT CTGGAAATCG CCGAAGTGAA ATTAGCCCGT
CTTCAGGAGA GAACTTCCCT GGCCCAGGCA GAAACCGCCG TGGTGAAAGC ACAGGAGAAT
TTGGCCAAAG CAACCTTGGT TGCGCCTTCA GATGGTGTGA TTATTGAAAT TCCGGTAAAA
GAAGGGCAGA CCTTAAGCGA TACGACCACC GTGCTCAATT TAGCCACCGG AGGAGAGCTG
TTGATCGTAG AATCCTATGT CTCTCAGGAT GAAGTGACAA AGATTAAAAC AGGTCAGAAG
GCCAATATCT CCCTGGATTC TGCGCCGGAG GATTATATGA GCGCAACGGT GACCCAGGTG
GCCCTAAAAG GAACAACGAC TCAAAATGTA ACCACTTTCC AGGTGACGAT GCAAATGGAT
GAAGTAACAG ACGCCATACG GCCGGGAATG AATGCTAATG TGGGGATTAT CATAGCCGAA
GCCAAAGATG TCCTCATCGT ACCGAGTTCA GCCGTACAAA CCCAGGGAGA TCAGAAAGGG
GTTCTCCTGC TCTCCAATCC GCCATCTTCA GGCAGTCCAT CCCCAGAGGG GCAGATGCAG
GGAAGGCCTT CCCAAAGGGA ACAAGTTCCA GGGGAACAAG CAGAAGCTCA AAAGGAACAG
GCTCAAGGGG AAGGCGCTCA GGCAGGAGCC GCTGAACCCA GGAATTCGGA GAGGTCCGCA
CCCCAGGGGA CAGCACAGTT TGTTCCCGTC GAGACGGGTC TGGATGATGG GACCAATGTA
GAGATTAAAA GCGGTTTAAC AGAAGGGCAA AGGATTGTGG CAGGGACACG AACAAGCTCA
TCCGGTTCCA ACACGAATGC CAATTCCAAC AGGAATATGA ACTCCCCCGC CGGAGTGATG
CCCGGTATGG GCGGCGGCGG CGGATTTGGC GGAAGCGCAC GGCCCATGAG ATAG
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| Protein sequence | MKKKLVITLV LGVVVLGGGG FWAYQHFQEK PQQTSLMTTT VKKGDIIQEI TATGTVMYPE
EVPLAFEQNG KVREIYVKVG DAVTAGQALA QMDTETLQQE VTESMASLKE AELNWQQQKV
EAEGTLVKAR QALRTAEQNA DPAYLQNQLA IAEQSLLIAG NNLAASQLSG DESSILQAKT
ALTQAQSDLI NVQNTYNGGA EQAVDSAKAD LEIAEVKLAR LQERTSLAQA ETAVVKAQEN
LAKATLVAPS DGVIIEIPVK EGQTLSDTTT VLNLATGGEL LIVESYVSQD EVTKIKTGQK
ANISLDSAPE DYMSATVTQV ALKGTTTQNV TTFQVTMQMD EVTDAIRPGM NANVGIIIAE
AKDVLIVPSS AVQTQGDQKG VLLLSNPPSS GSPSPEGQMQ GRPSQREQVP GEQAEAQKEQ
AQGEGAQAGA AEPRNSERSA PQGTAQFVPV ETGLDDGTNV EIKSGLTEGQ RIVAGTRTSS
SGSNTNANSN RNMNSPAGVM PGMGGGGGFG GSARPMR
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