| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1716 |
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| Symbol | |
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| ID | 7258685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1838739 |
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| End bp | 1840286 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643561618 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002458198 |
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| Protein GI | 219667763 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.013816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGGCGCA ACGTGCAGTA TATTACCTTT TCCATCGTTT ATGGGATTAT GATATTTATT
TGGACTTTTG TGTATCTGAA TAAAAGCAAG GATAAAGTCA ATGAGTCCTT TTTGGGCTTC
TTAACCGTGG TTATCCTCTG GATGGTTCTG AGCATAAGCA TCGCCGGCGA CGATATTTCC
ACCCTGGGGC TGGTGCTGAA AACGATCTAT TTTTACAGCA TGCTCAACAT GGCGGTTGCT
TTTTTGCTGT TTATCTACCG GTTTATCGGC AGGAAGCTGG ACGGGTTATT TTATATGTCG
GTGACCATCA ACACCCTGAC CATTCTGGCC AGGTACCTGT TTCCCATCGA TTATGCGGAT
CCGACCTTCT GGCGGCTGAC CGACCCGGTC GTCGCGCCGG TCATGTCCGC CTTGTTCAGT
CTGCCGGCTG TGTTCGCCCT GATTCTTATT GTGCGGCACT ATAAAATGAC GCAGGACGGC
AAATTAAGAA CCCAATTGCG ATTCGTTTTG AGCGGGACCG GACTGGCCTG TCTGATCAGC
ATAGTTTCCG AATACATCCT GCCTGCTTAC TTTGGGCTGG AGAGCAATCT TTCTCTCATG
TATTTTGCCA TTCTTATTTT TATTGTTTAT ATTTTCCGCT CCATCATCAA GTTCAAATTC
CTGAATATAC AGTCCGACTA TGTGTACAGA AGGTTGTTTT TAAATTCCGG CGAAGGCATC
CTCATCATCA ACCGGCATTT AACCATCGTC AGCATCAACA ACCTGGCCAA AGAAATTCTG
GAGAATAAGG CCATTGAGCC GGGGGATAAG ATAACGCAGC TGATCAAAAC CTACGATTTT
GACACGAATT ATAAACAGCA GGAGATAACC ATTGTGGTGG AAAGCGGAGA AAAATATCTC
ACAATGACTC AGCATCCCAT AGACCCGGAT GATCGGGATT CAACCAAGCT CCTGGTGGTC
AACGATATAA CCTCCGCCAA GCTGAAGCTG AAGCAGGAAA AAGAGCTGCT GATGAAACGG
TCTTCCATCG ATCCGCAGAC CGGCTTCTTC AATAAGCAGT ATATGCTGGA CTATGATAAG
GCAGAAAGTC CGGAATTGGG CAATACGGCT TTGCTGTTTA TCGATATTGA CAATTTTAAA
TCCATCAATG ATCTTTACGG ACACCTGGCC GGGGACAGTA TCCTGAAATC CGTGGCGGAA
TGCATCAGGT GCAGCATAGG GAGCGAGGCA CAGGTCATAC GGTTCGGCGG GGATGAGTTC
GTGGTGATCT TTGCAAATCC CGGGAAGGAT GAGGCCTACC TGGCGGCGGA GGCAATCAGG
ACGAAGGTGA ATGCTCTGAT CTTGCCGGAG CACTACGGGG ATTTGACCCT ATCCCTCAGC
ATCGGCCTGG CGGAAGGCCG GGTTCCGGTC AGAGAGCTGA TCACCCAAGC GGACGAGGCC
ATGTACAGCG CCAAAAGCCA GGGCAAGAAC AGGACGATGA AAAGTCTGGT CAGGGATGTT
GCCGTTGAAA AAGGAGGCCG GCAACAATCG CAGTTATTGG AACCGTAA
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| Protein sequence | MGRNVQYITF SIVYGIMIFI WTFVYLNKSK DKVNESFLGF LTVVILWMVL SISIAGDDIS
TLGLVLKTIY FYSMLNMAVA FLLFIYRFIG RKLDGLFYMS VTINTLTILA RYLFPIDYAD
PTFWRLTDPV VAPVMSALFS LPAVFALILI VRHYKMTQDG KLRTQLRFVL SGTGLACLIS
IVSEYILPAY FGLESNLSLM YFAILIFIVY IFRSIIKFKF LNIQSDYVYR RLFLNSGEGI
LIINRHLTIV SINNLAKEIL ENKAIEPGDK ITQLIKTYDF DTNYKQQEIT IVVESGEKYL
TMTQHPIDPD DRDSTKLLVV NDITSAKLKL KQEKELLMKR SSIDPQTGFF NKQYMLDYDK
AESPELGNTA LLFIDIDNFK SINDLYGHLA GDSILKSVAE CIRCSIGSEA QVIRFGGDEF
VVIFANPGKD EAYLAAEAIR TKVNALILPE HYGDLTLSLS IGLAEGRVPV RELITQADEA
MYSAKSQGKN RTMKSLVRDV AVEKGGRQQS QLLEP
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