Gene Dhaf_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1713 
Symbol 
ID7258682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1833094 
End bp1835202 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content56% 
IMG OID643561615 
ProductFMN-binding domain protein 
Protein accessionYP_002458195 
Protein GI219667760 
COG category[C] Energy production and conversion
[S] Function unknown 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
[COG3976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCA CTATCTCACG CAGGGACTTT TTTAAGACTG CCGCTTTAGG GGCAGCCGGC 
ATCGGCCTCA TGGGACTGAC AGGCTGCGAC ACATCCGTAG TAAATGAGAC TCCCGGGGCG
GACCCCACAT CACCGGAAGG CTCCGCCGCG CTTCCCGACC CTTTCACCCT TGAAGAGTTT
AAGGATTCAC TGGTACAGCT TGACCCTATT GCCAGTTTTG TTGGCGAGGT TACAGTAGAC
ATCGTCGTTG TCGGCGCCGG TGCGGCCGGT GTACCGGCGG CAGTCACCGC CGCTGAGGAG
GGCAATTCCG TCGCCGTGCT GCAAAAGCAG AGCACGGTCG TCTCTCAAGG CAACTGCGGT
TCCGGTCTTA TTATCGACAA AAGTGACACC GAGGGGCTCC TTCGTTATGT CCAGCAGACC
AACAGTCTGA ACAGCTGGCG CTCCGACCCT GAGCTTCTTA AAGCCTACGT TATGCATTCC
GGCGAGGCCG TGCAATGGGT ATACGACCGC GCCCGCCTGA CCGGCACTTC CGCCGGCAAG
CCCAATGACA AAGGACTCTT CGCTTACCTG GACACCAGCC AGGATTTCAC CGGAGAATGG
ACCGACCATC GTTACAGCAA GTTCGACTAC GGTACGGCTA AAGCCCATAT GTATGCGCCC
TGGATGGGAC CGAAACCCAA TAATATCGGC ACGTACCTGA GCTACGTGCT GGACGAGGCC
GCCCAGCAAT ATTCCGACCG CATGAAGATT TATTACAGCA CTCCGGGGGT TCAGCTTATT
GTGGATGCCG GCCGGGTGAA GGGCGTCGTT GGCAAGCTTG CCGACGGGAC TTATGTGAAG
TTTAATGCTA ATAAAGCCGT TATCCTCGCC ACCGGTGACT ATCAAAACAA CTCTGCCATG
GTGAAGCACT GGTGCCCGGA TGTAGAGAAC TTCGACAAGA AACAGTTCCA GAAGACGGGC
GACGGCCACC TCATGGCGGT CACCGCCGGG GCTGTCATGG AAAAACTCGG GCATACCAAA
ATGCTCCACG ACTTTGATGC CGGCCTCATG TATGAGGAGC CCTTCCTTTC CGTCAACATG
AAAGGCAAGC GCTTCTGCAA TGAGTTCATC GGTTTTGTCT ACATGAACGA CATGATGCTC
CATCAGGATA TGTACAAGGG CGGCAAGAAC TACGACGTTC CGGAGAAGGG TTCTCTCGGG
TGGTATTGCC AAATCTACGA CAGCGACTAC ATGAGCCATG AAGCTTTCGA ATCCTTAGTC
CCCCCTGCCG TCATGGAAAA ATACATGCCG GGAATTACCG ATGAACACTA TGCCGCCTCT
CATAATGGCG CAGCCCGCAC AGGCGTCTTC CCCCACCTGA TCGACACCTG GCGTGCCGAC
AGCCTCGACG AGCTGGCCGA CAAGCTCGGC ATTGAGGATA AGCAAGCGTT CCTGGCCACT
ATCGAGCGCT ACAACACGTT GTGCTCAAAG GGTGCGGATG AAGACTTCGG CAAGGATAAA
AAGTGGATGA ATGCTATTAA AAAACCTCCT TTTTATGGAA TCCGGCGCCA TCTGCGCGTC
TCGGCCCTCT GCTCCGGTGT CTATATAAAC GCCAACGGAC AAACTCTCGA TGAAAACAAG
ACACCTATCG AAGGACTTTA TTGTGCCGGC AACCTGGGCG GACAGTTCTA CGGCGCGGCG
GATTATCCCT TCCATGCTAC AGGCCTCTCC ATCGGGCGCT GCTTCACCTT TGGCCGTCTG
GCCGCTAAGC ACGCCGCCTC CCTTTCCGGC GGCAGTGGCA AGATCGCCGA GTCCGGCACC
ACCACCGTTG CCGCAAGCTC TGTCGGTTCT TCCGGCAATT GGAAGGACGG CACCTATCAG
GGCAAGGGCT CCGGGGTCTT CGGAGACGAT ATTAAGGTGA GCGTCACCAT CGCCGGCGGC
AAGATCACCG CCATCACCGT AGACGAGCAG AAAGAAACCG AAACCATCGG CGGCGTGGCA
TTGCCCACGT ATATCGAAGC GGTGATCGCC AACCAGTCCA CCGGGATTGA CGCGGTCTCC
GGCGCTACTA TGACACTAAA AGGTTTCACT GACGCAGTAA ACGATGCCCT GGCCAAAGCA
TCTGCCTAA
 
Protein sequence
MSTTISRRDF FKTAALGAAG IGLMGLTGCD TSVVNETPGA DPTSPEGSAA LPDPFTLEEF 
KDSLVQLDPI ASFVGEVTVD IVVVGAGAAG VPAAVTAAEE GNSVAVLQKQ STVVSQGNCG
SGLIIDKSDT EGLLRYVQQT NSLNSWRSDP ELLKAYVMHS GEAVQWVYDR ARLTGTSAGK
PNDKGLFAYL DTSQDFTGEW TDHRYSKFDY GTAKAHMYAP WMGPKPNNIG TYLSYVLDEA
AQQYSDRMKI YYSTPGVQLI VDAGRVKGVV GKLADGTYVK FNANKAVILA TGDYQNNSAM
VKHWCPDVEN FDKKQFQKTG DGHLMAVTAG AVMEKLGHTK MLHDFDAGLM YEEPFLSVNM
KGKRFCNEFI GFVYMNDMML HQDMYKGGKN YDVPEKGSLG WYCQIYDSDY MSHEAFESLV
PPAVMEKYMP GITDEHYAAS HNGAARTGVF PHLIDTWRAD SLDELADKLG IEDKQAFLAT
IERYNTLCSK GADEDFGKDK KWMNAIKKPP FYGIRRHLRV SALCSGVYIN ANGQTLDENK
TPIEGLYCAG NLGGQFYGAA DYPFHATGLS IGRCFTFGRL AAKHAASLSG GSGKIAESGT
TTVAASSVGS SGNWKDGTYQ GKGSGVFGDD IKVSVTIAGG KITAITVDEQ KETETIGGVA
LPTYIEAVIA NQSTGIDAVS GATMTLKGFT DAVNDALAKA SA