Gene Dhaf_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1709 
Symbol 
ID7258678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp1825321 
End bp1825902 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content41% 
IMG OID643561611 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002458191 
Protein GI219667756 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC ATGATGATTT ACGGGTTATC AAAACCAGAA AACTGATTAA GGAGGCTTTC 
TACGAAGCCG TCCATGAAAA AGGCTTCGAT AAGATCACGG TCAGCGATAT TGCCGGCAAG 
GCCATGATCA ACCGGTCTAC CTTTTATCTG CACTACAAAG ATAAGTTTGA TCTGTTGAGA 
AGTCTGGAAG ATGAAGTGCT GGAGGATATT GAAGAGATTT CTTTATCCGT TACGAGAGAA 
TCTATTCAGG CCAGCCGCCT TACCGGAGCA CCTTTTCCCC ACATTGTTAA GCTGCTTACC 
TATGTCCAGG AGAACTCCGA ATTCTTCCAA TTAACGGTGC GTGATAATAC CTATCTGTCT 
TTTTACAATA AGATGGGGGA TCTGATCAGT AAAAGAACCT TTGAGGTTAT CTTTCCTCAA 
CTGACATTGG ATGGGTTATT TTCTAAATAT CTCAAACATA TTGTCGTAGC CATTTTCAGC 
AGCATTATCA ACCAATGGAT TAAAAACGGC ATGCAGGAAA CAAAGGAAGA CATCGCCTCT 
CTGATAACCA AAATAGCTCT GTCGTTTTTA GCCATCAACT GA
 
Protein sequence
MNKHDDLRVI KTRKLIKEAF YEAVHEKGFD KITVSDIAGK AMINRSTFYL HYKDKFDLLR 
SLEDEVLEDI EEISLSVTRE SIQASRLTGA PFPHIVKLLT YVQENSEFFQ LTVRDNTYLS 
FYNKMGDLIS KRTFEVIFPQ LTLDGLFSKY LKHIVVAIFS SIINQWIKNG MQETKEDIAS 
LITKIALSFL AIN