| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1664 |
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| Symbol | vanB |
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| ID | 7258633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1779555 |
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| End bp | 1780580 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643561566 |
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| Product | D-alanine--D-lactate ligase |
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| Protein accession | YP_002458146 |
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| Protein GI | 219667711 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAAGT TGAAAATCGC AATTATCTTC GGAGGCTGTT CCGAAGAACA TCCCGTCTCC
GTTAAATCTG CTGGGGAGGT GGCCAAAAAC CTGGATCTCG AAAAGTATGA ACCCTTCTAT
ATCGGGATTA CGAAAGATGG GGTTTGGCAG CTTTGTCACT ACCCTGAGGC CAATTGGGAA
AAGGGCAGTT GCCGTCCGGC TATCCTGTCA CCGGACAGAA GCGTCCAGGG ATTGCTTGTT
CTGGAGCAGG GGCAATACCA AAGGATCCCC TTGGATCTGG TGTTTCCCGT TCTGCATGGC
AAATTTGGCG AGGATGGCGC GATACAGGGT TTGTTGGAGC TTTCCGGCAT CCCCTATGTG
GGCTGCGATA TCCCGAGTTC GGCTCTGTGC ATGGACAAAT CCCTGGCTTA TATCGTCGCT
GGAAAGGCAG GAATTGCCAC GCCAAAGTTC CGGACGGTCA CTGCGAAGGA GACTATTGAC
GCCGAACGGC TTGCTTATCC CGTTTATGTC AAGCCGGCCC GTTCGGGTTC ATCCTTCGGC
GTCACTAAGG TATGCCGCCA AGAAGAATTG CTGAGTGCGG TGGAAATCGC CAGACAGTAT
GACTCGAAGG TGCTGATTGA AGAGGCTGTC GTCGGCAGCG AGGTAGGCTG TGCGATATTT
GGAAACGATC TGGATTTGAT GGCCGGTGAG GTCGATCAGA TCTGTCTGTC TCATGGCTTT
TTCAGAATCC ATCAGGAGAA TGAGCCGGAA AAGGGTTCCG AAAACTCAAC ACTAATCGTT
CCCGCCGACA TTTCCCCAGA GGCGCGCTCG CGGGTTCAGG AGACGGCAAA AGCCATCTAT
CGCGCTTTGG GCTGCAGGGG ACTGGCGCGG GTGGATATGT TTCTGAAAGA AGATGGAACA
GTAATCCTCA ACGAGGTGAA TACTTTGCCC GGCATGACCT CATACAGCCG TTTTCCGAGA
ATGATGGCGG CCGCAGGCTT GCCCTTTGCC GAAGTGATCG ACCGGCTTGT CTCGTTGGCC
TTTTAA
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| Protein sequence | MSKLKIAIIF GGCSEEHPVS VKSAGEVAKN LDLEKYEPFY IGITKDGVWQ LCHYPEANWE
KGSCRPAILS PDRSVQGLLV LEQGQYQRIP LDLVFPVLHG KFGEDGAIQG LLELSGIPYV
GCDIPSSALC MDKSLAYIVA GKAGIATPKF RTVTAKETID AERLAYPVYV KPARSGSSFG
VTKVCRQEEL LSAVEIARQY DSKVLIEEAV VGSEVGCAIF GNDLDLMAGE VDQICLSHGF
FRIHQENEPE KGSENSTLIV PADISPEARS RVQETAKAIY RALGCRGLAR VDMFLKEDGT
VILNEVNTLP GMTSYSRFPR MMAAAGLPFA EVIDRLVSLA F
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