| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1647 |
|---|
| Symbol | |
|---|
| ID | 7258616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 1760563 |
|---|
| End bp | 1761834 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643561549 |
|---|
| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
|---|
| Protein accession | YP_002458129 |
|---|
| Protein GI | 219667694 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000000043909 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGATTAA TTGCAGTACT ATTCACAGCC CTGGCTATGC TACTAAACTT CGCAGTACCT
GTCTTCGGCT CTCCAGATAA AGTACCGGTT CCGGAACTAA GCAGCGAAGG CGCCATTTTA
ATTGATATTA CCACAGGCCA GACCCTCTTT GCCAAAAATC CCGATCATCC TTTTGAACCG
GCCAGCACTA CCAAAATTAT GAGCGCTCTC ATTGCTCTGG AAAAAGGAAA TCTAAATGAT
CTGGTAACCG CCGGTCCCTC CGTGCTGGAT CAGGAATTAA CCCAGGGAAC ACGTATCTAT
CTGGAACCAG GTGAGCAAGT GACCCTGGAA AATCTGCTAT ATGCTTTGCT GCTTAACTCT
GCTAACGACG CAGCGGTGGC CATTGCAGAG CATATTGGCG GCGATGTTCA AGGCTTCACA
GATTTGATGA ATGCTAAGGC CAAGGAAATC GGAGCATTAA ACACCTCTTT TAAGAACCCC
AGCGGCTTAA GCGAGGACGG TCATCTAACT ACAGCCCGGG ATCTGGCAAT GATTGCCCGT
TTTGCTTATC AAAATCCTGT CTTGAGAGAT TACGTCAAGA CGAAGACGAA GATTATCCCC
AGAAACAGAG AAAATATTCC CACGGAAATG TATAACATCA ATGAGTTTAT CTGGACCGAG
CCTACCGTAA CCGGTATGAA AACCGGTTAT ACCACTTCAG CCGGTAATAC CTACGTCGCT
ACTGCTGAGA GAGACGGACG CGCCTTACTT GGCGTTGTTT TAAAGTCGCC AAGCAAGACA
AGCATCTATA CGGATATGAG AAACCTTTTC GAATATGGTT TTACCAACTT TGAAAATGTA
GTCTATAAGC CCAAAGGCAC GGCGCTTTCC AGTCTAATGG TGAGTGATAC CCCCGTTAAT
CTCATTCTTA CCGACGAGAT AATCCATACC AGAGAAATTG GCAGTACCGC CCCCCCGGAT
ATATCGCTTC ATGTACTGCC GATTGCTTCC GAGCTCAAAG AAATAAGGAA AGATCAGGTT
CTAACCAGCG TCCAAACGGT AGAGGAGGAT AGGGTTCTTA ATTCCTTTGC CTTAATGGCC
GACAGCAGTG TTATCCCCCC CATACCCCCC CAGCCGCCCA GTAAAAAATC CTTCAATTGG
GCTGCGCCAA TTATCTCAAT CTTGTTATTT TTTCTCTATA TGGTATATAG GAGAGTATCC
TATCTAAGAA GACATCGAAG CATTGAGCGG AAAATGACAG CCGGAAGATA CCGGGACAGG
GATCTCTTTT AA
|
|---|
| Protein sequence | MRLIAVLFTA LAMLLNFAVP VFGSPDKVPV PELSSEGAIL IDITTGQTLF AKNPDHPFEP
ASTTKIMSAL IALEKGNLND LVTAGPSVLD QELTQGTRIY LEPGEQVTLE NLLYALLLNS
ANDAAVAIAE HIGGDVQGFT DLMNAKAKEI GALNTSFKNP SGLSEDGHLT TARDLAMIAR
FAYQNPVLRD YVKTKTKIIP RNRENIPTEM YNINEFIWTE PTVTGMKTGY TTSAGNTYVA
TAERDGRALL GVVLKSPSKT SIYTDMRNLF EYGFTNFENV VYKPKGTALS SLMVSDTPVN
LILTDEIIHT REIGSTAPPD ISLHVLPIAS ELKEIRKDQV LTSVQTVEED RVLNSFALMA
DSSVIPPIPP QPPSKKSFNW AAPIISILLF FLYMVYRRVS YLRRHRSIER KMTAGRYRDR
DLF
|
|---|
| |