| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1637 |
|---|
| Symbol | |
|---|
| ID | 7258606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1751295 |
|---|
| End bp | 1752152 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643561539 |
|---|
| Product | Polysulphide reductase NrfD |
|---|
| Protein accession | YP_002458119 |
|---|
| Protein GI | 219667684 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0000405044 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGAAATT GGGGCTGGCT TATTATTGGC TTCCTGTTCT TTGGCGGTCT TGGCTCGGGT
GCTTATCTGA CATCTTTTGC AGCGGAAAAA GGTTTGTTTG GCAAAGAGAG TAATTTGGTG
CGGGCCGGTT ATTTTATTTC AGGTCCTTGC CTGGCCGTGG GGCTGTTTCT TTTTTCCCTG
AATCTGGGTG TCAGCATCAC TGGAATTTTA ACCATGATCG GTAATCCTAC GTCGGTGATG
ACTTGGGGGG TCTATCTCTT AATCATGTTT ATGGTCCTGG CCTTTTGGAG TGCCTATCAT
AAACGTGAAA ACAAGCAAGT TCCGGCAATG ATCTCAGGAG CGGGAGCATT ACTGGCAGTG
GTAACAGCCA TATACACCGG GGGGCAGCTT TCCGTTCTTT TTGCTCAACC CTTCTGGAAC
ACGATCCTTG TACCGGGATT ATTTGTAGTG TCGGCACTGA TCATGGGATT GGCTTCTTCA
TCCCTGCTGG CCCGCATCAT CGAAAAACCC GTTCAGCAAG GGGGGGCTGC GGTAACCAGG
ATAAACATCA GCCTCCTCTT GGTGGAATGG GTGCTCTTAG CGGCTTTGCT TCTGCTCTCT
TTTTCAGGGG CTAAAGGTCC GGTTGCTGCT GATTCTGCCC AAATAGTTGT CACCGGAAGA
CTAGCCGCCT ATTTTTGGAT TTTGTTAATT GCTGTCGGAT TGGTTTTGCC GCTTTTCAAC
AACGTCTATC CCAAGAAAAA GCAAAACGAA AAGAGTGGCA AGATCTTCGG TTTGTTAAGC
GAGGTGGCCA CACTGATCGG AGGGGCAACC CTGCGGGCCG TTATCGTATT GTCGGCATTG
CCTATCTGGA GTATATAA
|
|---|
| Protein sequence | MGNWGWLIIG FLFFGGLGSG AYLTSFAAEK GLFGKESNLV RAGYFISGPC LAVGLFLFSL
NLGVSITGIL TMIGNPTSVM TWGVYLLIMF MVLAFWSAYH KRENKQVPAM ISGAGALLAV
VTAIYTGGQL SVLFAQPFWN TILVPGLFVV SALIMGLASS SLLARIIEKP VQQGGAAVTR
INISLLLVEW VLLAALLLLS FSGAKGPVAA DSAQIVVTGR LAAYFWILLI AVGLVLPLFN
NVYPKKKQNE KSGKIFGLLS EVATLIGGAT LRAVIVLSAL PIWSI
|
|---|
| |