Gene Dhaf_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1623 
Symbol 
ID7258592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp1734594 
End bp1735211 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content44% 
IMG OID643561526 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002458106 
Protein GI219667671 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones83 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATATA AAACCCCCAA ACATGTTCAA GAGAAAAAGG ATGCCAAGAA ACATCATATT 
CTCGATACCG CTTTAAAATT ATTTGCACTA AAGGGCTTTG AGAACACCTC GATTCAGGAC 
ATTTGCCAGG CAGCGGAGGT ATCTGTGGGG TCAATGTACT TTTATTTCCC CAGCAAAGAA 
GACATTTATG AGGAAGTATA CTCCCGCATC AACAATCAAT CTCTCCAGCA CTTGGAACGG 
GCTGTCGCTG GTGCCGCAAA TCTTGAGGAA ATCATCCGGA AAGTAATCGA AACCATCGTA 
TTGTCTGCTC TGCCCGACCG TACCGAAGCA CAGTTTTTTC TTGCCAACCG AACCATGAGC 
AATCTCAAAA TCAAGCGTGA TGATTCCCTG CAAAAGTTCG CCCGCTGGTT TAAGGCCATA 
CTTGATGAGG CTGTTGAAAA TGGGGAATTC AATCCTCAAA ATACGGAACT GGCTGCGGTA 
AGCTTTATTT ACGGCACCTA CCAGAGCGTC CGTTACTGGA ATGTTTTTCA GCTTGAGACA 
TCCCCGGAAG AAATGATCGA TACCCTTTAT ACTTATCACA GCAAAGGTCT TGGCTTAGAA 
AACTGCACAC CAAAGTAA
 
Protein sequence
MAYKTPKHVQ EKKDAKKHHI LDTALKLFAL KGFENTSIQD ICQAAEVSVG SMYFYFPSKE 
DIYEEVYSRI NNQSLQHLER AVAGAANLEE IIRKVIETIV LSALPDRTEA QFFLANRTMS 
NLKIKRDDSL QKFARWFKAI LDEAVENGEF NPQNTELAAV SFIYGTYQSV RYWNVFQLET 
SPEEMIDTLY TYHSKGLGLE NCTPK