Gene Dhaf_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1620 
Symbol 
ID7258589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1729640 
End bp1730569 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content51% 
IMG OID643561523 
Producthypothetical protein 
Protein accessionYP_002458103 
Protein GI219667668 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones71 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAAA AAATAATCAT TGGCGAAGGA ACACCATACC CTTTGCAGGG AATTTTGTCC 
TTGCCGGATC ATTGTTCGGC AAGAGTTCCG GCTGTGGTTC TGGTGCACGG CTCCGGCCCT
GCGGATAGGG ATGAAAGCAT CGGCGCCAAT AAGCCGTTCC GCGATATTGC CGAAGGGCTG
TCAAATAAAG GAATCGCCGT ACTTCGCTAT GACAAGCGCA CAAAGGTTTA CGGAAAACAG
CTGCTGAAAG CAGGCCCCAG CGCTGTAACT GTGAAAAGCG AGACCATCGA GGACGCCATC
CTCGCCGCCA AACTGCTTAA AAATGATGAC AGAATTGACC CTGACCAGGT ATATATTTTG
GGTCACAGCC TCGGCGGGAT GCTCGCGCCG CGTATTGACG CGGAGGGCGG CGATTTCGCG
GGCATGATCA TCTGCGCAGG CTCACCGCGC CTTTTTAGCG ACATTTTATT GAGTCAAAAC
GAGGATATGC TGGGCCAACT GCCAAAGTTG CTGCACTGGA TCGCCAATAA GCAAATCGCA
AAGCTCAAAG CCAAATTCAC CGCCATCGCC GGCATGAGTG AAGAAGAAGC CAAGCAGGTG
AAGGTTTTTG GCAAAACCTA CGCATGGTAT TTCAAGGAGA TGGACGCCCA TCCAGCTGCC
GATTACCTTG CCAGGACGGA AAAGCCCGTT CTGATTTTGC AGGGCGACAA GGATTTTCAA
GTCACCGCAG AAAAGGATTT CGCTCTCTAT CAGCAAATCT GCATCGGTAA GCCCAATGTC
TCTTTCAAGC TCTACCCCGG ACTGAACCAC CTGTTTATGA AGTCGGTTTA CGGCAGGGTC
AAGGATTTCA AAAAAGAGTA CAAAGTCCCC CAAAAAGTGT CTGCAGAGGT TTTAGCGGAT
ATCGCAGAGT GGATAGCAAG GTATGATTGA
 
Protein sequence
MDEKIIIGEG TPYPLQGILS LPDHCSARVP AVVLVHGSGP ADRDESIGAN KPFRDIAEGL 
SNKGIAVLRY DKRTKVYGKQ LLKAGPSAVT VKSETIEDAI LAAKLLKNDD RIDPDQVYIL
GHSLGGMLAP RIDAEGGDFA GMIICAGSPR LFSDILLSQN EDMLGQLPKL LHWIANKQIA
KLKAKFTAIA GMSEEEAKQV KVFGKTYAWY FKEMDAHPAA DYLARTEKPV LILQGDKDFQ
VTAEKDFALY QQICIGKPNV SFKLYPGLNH LFMKSVYGRV KDFKKEYKVP QKVSAEVLAD
IAEWIARYD