Gene Dhaf_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1605 
Symbol 
ID7258574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp1714574 
End bp1715212 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content45% 
IMG OID643561510 
Productcobalamin B12-binding domain protein 
Protein accessionYP_002458090 
Protein GI219667655 
COG category[R] General function prediction only 
COG ID[COG5012] Predicted cobalamin binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00000212682 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGGAA TGGATGACAA ATTGATTAAG GCAATGGCAG AATTAGATGA GAAAGCCGTT 
TTGAAGCTGG TAAAAGAGGA GCTTAGCCAG GGCTTGGAGC CTTTATCTAT TCTGAAGCAG 
ATCCAGACCG GGATAGAAAA GGTAGGGGAG CTTTACGAAA AAGGCGAATA TTTCATTGCC 
GATCTGATCA TGTCCGGCAT CATCTTCAAC AATGTGCTGA AGATTGAAGA AATGAATCTC 
TATACCACTG AAAGCAAAAA ATGCAAGATT GGCAAAGTTT TGTTGGGGAC TGCCAAAAGC 
GATTTGCACG ATATTGGCAA AAATGTTTTC GGCAGCATGA TGAAAATGGC TGGATTTGAA 
GTTCTGGATT TAGGGGTTGA TGTTGCCCCG GAAACCTTTG TCGCACGTAT CAAGGAGTTT 
AGGCCCCAGA TTGTGGGGAT AAGCGGCGTC CTGATTGTTG CGCTGGAGGG CATGAAAGAG 
ACAGTGGAAT TAATAACTGC CGCCGGTTTA AGGGATTCGG TCAAGATTAT TCTCGGGGGG 
ACAATTGTCA AAAACGGCGT CGATTTTATC GGAGCCGATG CCTATACGGT CGACCCCTCA 
GAAGGGGTGA AACTATGTTT GGATTGGTTC GAAGCATAA
 
Protein sequence
MSGMDDKLIK AMAELDEKAV LKLVKEELSQ GLEPLSILKQ IQTGIEKVGE LYEKGEYFIA 
DLIMSGIIFN NVLKIEEMNL YTTESKKCKI GKVLLGTAKS DLHDIGKNVF GSMMKMAGFE 
VLDLGVDVAP ETFVARIKEF RPQIVGISGV LIVALEGMKE TVELITAAGL RDSVKIILGG 
TIVKNGVDFI GADAYTVDPS EGVKLCLDWF EA