Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1601 |
Symbol | |
ID | 7258570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1710143 |
End bp | 1711327 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643561506 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002458086 |
Protein GI | 219667651 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0564128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTTCCG AACAACCGGC CAGGGAGTGC CGGGATTTCC TGATTCTCCT GATTTCCGCT TTTTTTATCT ATACCTACAA CAATATCTTT ATGGTGGTAA CACCGGTACT GCTGGTCAGG ATGGGCGGTA CGGATATGAT CGTGGGCTTG CAGTCAACCC TCTTTCTGGC TGCGGCTGTA ATCCTGCGTT TCTTTTTCGG ACCCCTGGCC GATGTGCGGG GCAGGCGCTT TGTCATGCTC CTGGGCAGCG CCTCTTTTTT GCTTGCCTCG GTTATGCTCT GTTATGCCGG AACAGTTTGG CAGGTTGTCC TGCTGCGCCT GCTGCAGGCA GTAGGGTTGG CTTCATATTT TCCGGCCGCT TCGGCAACGG CCGCCACTTG CGGGGGCAGT GGCCAAAAAG GTCAATATAT CGGCATCTTG CGGATGGTGG CGTCATTATC TTTGATGGTT GGCCCTGTTG GTGCTCTTTA TATCATTCAA AATTACAGGT ATCCTTTGTT TTTTCAGGGG ACGGCTTGGT TGGCTTTGTT AGGGATGCTG CCCATCTTCT TGATTTCTTT AAAGAAAGCC GGGCCTCCTC AGGAAACAAA CCCAAGGGAA ATGAATTTGC GGCAAAGGCT CAATTTATGG ATATTTCTAC AAAAGTGTCC CTTGATTATA AGCAATACTT TTGCCGCCGC CTTGATTTAC GGGATCCTGA TCTCTTTTGC GGTTTTATTT CTTAAAGATG AAACCAAGAT TAGCAATCCG GGTTATTTTT TTACCCTTTT CTCCCTGGGA GGAATCCTGG GCAATCTTGG TTTCGGCTGG CTTTCCGATC GTTGGGGCCG CTTGCCCATC AACAGCTGGT CCTTTTTATT ATTGGGCGGC GGGATCATTC TTTTCTCAAT CATCCCGCAA GTGCCTCTTT GTTTTTATCC CGCCGGATTA TTTTCCGGGG CCGGTTATTT TGGCAGCATC GCCGTATTAA TGGCCTGGAT GACCGAAAAA GCTGAATTGA ACGAACGCAC GACCGCCCTT TCTTTGCAGC AGAACGCCTT GGACATGGGG ATTGCGGCGG GCAGCGGCAT GTTCGGGATG CTGCTGGCCG CAGTCGGCAA CGCTGCTTGG CTCTATGGAA CTTTAGGAAT GGTGTGGGTT GGCTATGCTT TTATAGTTTC AAGATATAGC GGGTTTAGGG GCTAA
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Protein sequence | MCSEQPAREC RDFLILLISA FFIYTYNNIF MVVTPVLLVR MGGTDMIVGL QSTLFLAAAV ILRFFFGPLA DVRGRRFVML LGSASFLLAS VMLCYAGTVW QVVLLRLLQA VGLASYFPAA SATAATCGGS GQKGQYIGIL RMVASLSLMV GPVGALYIIQ NYRYPLFFQG TAWLALLGML PIFLISLKKA GPPQETNPRE MNLRQRLNLW IFLQKCPLII SNTFAAALIY GILISFAVLF LKDETKISNP GYFFTLFSLG GILGNLGFGW LSDRWGRLPI NSWSFLLLGG GIILFSIIPQ VPLCFYPAGL FSGAGYFGSI AVLMAWMTEK AELNERTTAL SLQQNALDMG IAAGSGMFGM LLAAVGNAAW LYGTLGMVWV GYAFIVSRYS GFRG
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