Gene Dhaf_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1601 
Symbol 
ID7258570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1710143 
End bp1711327 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content50% 
IMG OID643561506 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002458086 
Protein GI219667651 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0564128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTTCCG AACAACCGGC CAGGGAGTGC CGGGATTTCC TGATTCTCCT GATTTCCGCT 
TTTTTTATCT ATACCTACAA CAATATCTTT ATGGTGGTAA CACCGGTACT GCTGGTCAGG
ATGGGCGGTA CGGATATGAT CGTGGGCTTG CAGTCAACCC TCTTTCTGGC TGCGGCTGTA
ATCCTGCGTT TCTTTTTCGG ACCCCTGGCC GATGTGCGGG GCAGGCGCTT TGTCATGCTC
CTGGGCAGCG CCTCTTTTTT GCTTGCCTCG GTTATGCTCT GTTATGCCGG AACAGTTTGG
CAGGTTGTCC TGCTGCGCCT GCTGCAGGCA GTAGGGTTGG CTTCATATTT TCCGGCCGCT
TCGGCAACGG CCGCCACTTG CGGGGGCAGT GGCCAAAAAG GTCAATATAT CGGCATCTTG
CGGATGGTGG CGTCATTATC TTTGATGGTT GGCCCTGTTG GTGCTCTTTA TATCATTCAA
AATTACAGGT ATCCTTTGTT TTTTCAGGGG ACGGCTTGGT TGGCTTTGTT AGGGATGCTG
CCCATCTTCT TGATTTCTTT AAAGAAAGCC GGGCCTCCTC AGGAAACAAA CCCAAGGGAA
ATGAATTTGC GGCAAAGGCT CAATTTATGG ATATTTCTAC AAAAGTGTCC CTTGATTATA
AGCAATACTT TTGCCGCCGC CTTGATTTAC GGGATCCTGA TCTCTTTTGC GGTTTTATTT
CTTAAAGATG AAACCAAGAT TAGCAATCCG GGTTATTTTT TTACCCTTTT CTCCCTGGGA
GGAATCCTGG GCAATCTTGG TTTCGGCTGG CTTTCCGATC GTTGGGGCCG CTTGCCCATC
AACAGCTGGT CCTTTTTATT ATTGGGCGGC GGGATCATTC TTTTCTCAAT CATCCCGCAA
GTGCCTCTTT GTTTTTATCC CGCCGGATTA TTTTCCGGGG CCGGTTATTT TGGCAGCATC
GCCGTATTAA TGGCCTGGAT GACCGAAAAA GCTGAATTGA ACGAACGCAC GACCGCCCTT
TCTTTGCAGC AGAACGCCTT GGACATGGGG ATTGCGGCGG GCAGCGGCAT GTTCGGGATG
CTGCTGGCCG CAGTCGGCAA CGCTGCTTGG CTCTATGGAA CTTTAGGAAT GGTGTGGGTT
GGCTATGCTT TTATAGTTTC AAGATATAGC GGGTTTAGGG GCTAA
 
Protein sequence
MCSEQPAREC RDFLILLISA FFIYTYNNIF MVVTPVLLVR MGGTDMIVGL QSTLFLAAAV 
ILRFFFGPLA DVRGRRFVML LGSASFLLAS VMLCYAGTVW QVVLLRLLQA VGLASYFPAA
SATAATCGGS GQKGQYIGIL RMVASLSLMV GPVGALYIIQ NYRYPLFFQG TAWLALLGML
PIFLISLKKA GPPQETNPRE MNLRQRLNLW IFLQKCPLII SNTFAAALIY GILISFAVLF
LKDETKISNP GYFFTLFSLG GILGNLGFGW LSDRWGRLPI NSWSFLLLGG GIILFSIIPQ
VPLCFYPAGL FSGAGYFGSI AVLMAWMTEK AELNERTTAL SLQQNALDMG IAAGSGMFGM
LLAAVGNAAW LYGTLGMVWV GYAFIVSRYS GFRG