Gene Dhaf_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1578 
Symbol 
ID7258547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp1686974 
End bp1687666 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content46% 
IMG OID643561484 
ProductGntR domain protein 
Protein accessionYP_002458064 
Protein GI219667629 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00244066 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCATTC AGAAAGCGAG CAGATCCACA TTAGTGGGGC AGGTAACTGC CCAACTGGAG 
CATATGATCG AAAGCGGACA ATGGCAGATT GGTGAAAAAA TACCTGCGGA GCCGGAATTG 
ATGGATAGGT TTGATGTAAG CAGAAATACC CTAAGAGAAG GAATCCAAGC CCTGGTTCAT 
GTCGGGTTGC TGGAGACCCG TCAAGGCATC GGGACTACGG TAAAAGCCAA CAGTAACTTT 
GCCCTGGCCT TGGCAAAGAA AGTTCAAAAA AGCAATCTTT ATGAAACCTT AGAGGTTCGC 
TTAGGATTGG AGAGAGAAGC CGCTCAGCTG GCCGCCGGGA AAAGAACGGC AGAGGATTTG 
CAACACATTG AAGCTTGCCT TGAACTTTGC AAAGAAGCGG CCCAAAGCCA TGAATTGGGC 
CGATTTATAG AGGCGGATAC GGCTTTTCAT AAATCTGTGG TAAAAGCCAC CCATAATACA 
ATGTTTATTG AAATGTACGA GCACATTACC GATGCTTTAC AGCGTTCGGT GGATGAGGTT 
TTGCGAATCA GAAATCCTAT CAATTATGAA AACGAAATCC ATACCAATCT CTTTCAAGCA 
ATTCAAGCCG GCGACTCCCA GCTGGCGTTA GATAGCGTCA ATCATTATCT GGAGGATGCT 
AAGAAGTCTC TGAGTCATTT GATCAATGAA TAA
 
Protein sequence
MSIQKASRST LVGQVTAQLE HMIESGQWQI GEKIPAEPEL MDRFDVSRNT LREGIQALVH 
VGLLETRQGI GTTVKANSNF ALALAKKVQK SNLYETLEVR LGLEREAAQL AAGKRTAEDL 
QHIEACLELC KEAAQSHELG RFIEADTAFH KSVVKATHNT MFIEMYEHIT DALQRSVDEV 
LRIRNPINYE NEIHTNLFQA IQAGDSQLAL DSVNHYLEDA KKSLSHLINE