Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1567 |
Symbol | |
ID | 7258536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1671565 |
End bp | 1674615 |
Gene Length | 3051 bp |
Protein Length | 1016 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643561473 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_002458053 |
Protein GI | 219667618 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0336431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAA TGCTGATGGC GCTTGTTGCA GTGAGTTTCG GGTGTTTTCT TCTGCTTTTT GGCCTGTTGG AGACCACGGA TAATAAAGTC CTCAAATCAG AACTATCTCA GCAAGGGGTT CTGGATTTGC GGGATTGGGA TGCTGCTTCC GATCAGGTTG TTCCCTTGGA CGGACAATGG GAATTTTATT GGCATCAGCT GCTGGAACCG GGTGGAGAAC CTGATTCCGC GGCAAATGTT ATTCAAGTTC CGGGTTTTTG GCGAAATGAT ATGGCAACCA GGATTGACCA TGCCAGGGGA GCCGCTACCT ATCGCCTGAC GATCAAACTG AAGCCTTCGG ATACGGTTTA TGGGCTGAGG ATTTCCAACA TCCGGATGGC CAGCGCGATC TATGTGAATG GAAATCAGGC GGGGGGGAGC GGTAAGCCCG CTTTAACCCA GGATGAGTAT CAATACGAGA ATAAGCCGTA TAATGTATTT TTTCCCGTGC AGGGGGATAC GGCGGAAATT TTGATTCATG TGGCCAACTA TGAAAATAAT CAGGGAGGGA TTCCCTATCG TCTATATTTC GGCAGTGCCC AAGGCATTCA TACCTTAAAT ACCAATACGA CGCTGCTTAA TGTGAGCCTG ATTGTGTCCC TGCTCATGCT GGGGTGCTAT CAGCTGAGTG TCTTTATTAT CCGCAGAGAG GAAAAAGGTC CCCTCTATTT TGGCTTAAGC TGCGTCGTGA TTGCCTGGTC CTATGCCTCC ACCGGGGACA GGCTCCTGAT TGAGTACTTT AACCTGCCCA CGGAAATCTA TTATAAGATC CAGGCCATCT CTTTGTACTC TTCCCTGATT CCCATGGCCA TGTTCATCAA AACCATGTGC AAAGGACTGA TCCCCCGCTG GCTGACCAAG GGTATTATCT ATGGGATGGG TTTGTATAGC GGTGTTGTCC TTGTCACGCC CTTCCAATGG TATTCCCCCT TCAATTTATT GTTCAGCTTT ATTCAAATGG CGGCTAACAT CATCATCGTG GGGCTGTTGC TCTATTCTTT CCGGCAGGGA AGATACGGCG AATTCAACCG GAAAAGCCTG GGACTCTTTA TCCTGGCCTT GGGCTGCTAT CTTCTGGGTT TAATCGACTA TGGGCTCTAT CTGAGCAGTG TGGTTCTTGA TTATAAACTA GGATATTATG CGATTTTGAG CTTTTGTTTT CTGGCTTCGT TCATCATGTC GTACCAATTT TCCGAAGCCT ATAAGACCAT TGAAAGCATG GCTGCAGAGC TTCAGCAAGC CGACAAGCAA AAAGACGAGT TTTTGCTCCA TACCTCCCAT GAGTTTCAAA CTCCTCTCCA CGGCATCATC AATTTATCCC AAGCCATGCT GGAGACCGAG GGGGAACTGA GCGAAAATCA TCTGCAGAAT CTGGCTGTGA TCAGGGACAC CTCCCGAAAG CTGTCCGCTT TGGTCCGTGA CATTCTGGAC CTGGATAAAA TCAAGCGCAA TGAATTGACG GTTCATCCGG CTGAGGTCGA TGTCCGGGTG ACCGTTTCCC TGGTCTTTGA TTTACTTAAG CACTTGATTA CAGCGAAAAA AATCAGGCTG ATCAATAGGG TTCCTGAGGA TTTGCCTTTT GTTTATGCGG ATGAGAACCG GCTGCGGCAG ATTATCCATA ACCTGGTCGG CAATGCCATG AAGTTTACCA GTGCGGGAAC GATTGCCATT TCCGCCCAGG TCCTGGAGAA CCATGTGAAA ATTATGGTTG AGGATACCGG AGTGGGAATT GCCCCATCCG ACTGGGATAC GGTTTTTCAA CTTTTCGAGC AGGCCCACTC TCCCAATGAG TATGGCGGGA CAGGCTTAGG GCTTTTTATT TGCCGGAAAT TGGTGCAGAT GATGGACGGG GAAATTTATA TCGATTGGTC CGAGCCGGAG CGGGGAACCC GGATAGCCTT TACTCTGCCG CTGGCGGCAA AAGATTCGTG CTCTGCCCCG GCGTCCGTCC GGCCCCCGGA AAAATACCCA ATGGATGAAC CCTGGGGCAG GACGGAGCTG CCCCAAGGGG GCACGGGCAA GTTCACGCTG CTGGCTGTGG ATGATGATTC GGCCAACCTA CAGGTCTTAG CCCGCTTATT CGCTAATGAA CCGTATAACG TGCTTTGGGC GACCAATGGG CTGGAAGCTT TGGAGCTGTT AAAAAGCCGT TCGGATATCG ATTTGGTTCT GCTGGATGTG ATGATGCCCA GAATGTCAGG CTATGAGGTG TGCCGGGAGA TCAGGCGGCA GTTTTCCCTG TTTGAATTGC CGGTTATCTT ATTGACAGTG CGTCATTCTC CGGGCGATAT CGCGGCGGGC TTTAAGGCCG GGGCTAATGA TTTTATGATC AAGCCTTTCG ACGCCCTGGA GGTACGGGCC AGGACCGAAA CCCTCCTGCA GCTGAAACAG TCGGTTGCAG CCGCCTTGAA GGCCGAAATG GATTTTCTCC AATCACAGAT TAAGCCCCAC TTCCTGTTCA ACGCGCTAAA CGCCATTATC ACCTTATGCG GGACGGATGG GCTGCGGGCG GAGCAGCTGA TAACCCATTT GAGCTATTAC TTAAGGCGAT GCTTTGAGCC CCGGACGGAT AGTTTCTTGC TTTTGCAGGA TGAACTCCGG CTGGTGGAAG CCTATGTGGA AATTGAAAAG GCCAGATTTG AGGACCGCCT TACTGTGTTG TATGAGGTTG ATCCGGGCGC TTTGCTGAAG AGGATCCTGC CTCTCACCAT CCAGCCTTTG GTGGAGAATG CCATCCGCCA CGGGGTGATG AAGCGTGAGG AGGGGGGAAC CATCCGTCTG ACCATCCAAT TGGCAGGGGA TAGGGTTCAC GTTGAAGTGT GGGACAATGG GGTGGGAATA AGAGAAGAGC AATTAAAGAA TTTGTGGCTG AGCGATAACT CCTCTTCCGA GAGGCGGGGA GTGGGGCTGG CCAATATCCA GCGACGGTTG AAGCACTTCT GCGGGGAAGA ATTGCATGTA ACCAGTCGGG AAGGAGAATG GACCAAGGTT CAGTTTTGTT TCCGAGGGTG A
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Protein sequence | MRKMLMALVA VSFGCFLLLF GLLETTDNKV LKSELSQQGV LDLRDWDAAS DQVVPLDGQW EFYWHQLLEP GGEPDSAANV IQVPGFWRND MATRIDHARG AATYRLTIKL KPSDTVYGLR ISNIRMASAI YVNGNQAGGS GKPALTQDEY QYENKPYNVF FPVQGDTAEI LIHVANYENN QGGIPYRLYF GSAQGIHTLN TNTTLLNVSL IVSLLMLGCY QLSVFIIRRE EKGPLYFGLS CVVIAWSYAS TGDRLLIEYF NLPTEIYYKI QAISLYSSLI PMAMFIKTMC KGLIPRWLTK GIIYGMGLYS GVVLVTPFQW YSPFNLLFSF IQMAANIIIV GLLLYSFRQG RYGEFNRKSL GLFILALGCY LLGLIDYGLY LSSVVLDYKL GYYAILSFCF LASFIMSYQF SEAYKTIESM AAELQQADKQ KDEFLLHTSH EFQTPLHGII NLSQAMLETE GELSENHLQN LAVIRDTSRK LSALVRDILD LDKIKRNELT VHPAEVDVRV TVSLVFDLLK HLITAKKIRL INRVPEDLPF VYADENRLRQ IIHNLVGNAM KFTSAGTIAI SAQVLENHVK IMVEDTGVGI APSDWDTVFQ LFEQAHSPNE YGGTGLGLFI CRKLVQMMDG EIYIDWSEPE RGTRIAFTLP LAAKDSCSAP ASVRPPEKYP MDEPWGRTEL PQGGTGKFTL LAVDDDSANL QVLARLFANE PYNVLWATNG LEALELLKSR SDIDLVLLDV MMPRMSGYEV CREIRRQFSL FELPVILLTV RHSPGDIAAG FKAGANDFMI KPFDALEVRA RTETLLQLKQ SVAAALKAEM DFLQSQIKPH FLFNALNAII TLCGTDGLRA EQLITHLSYY LRRCFEPRTD SFLLLQDELR LVEAYVEIEK ARFEDRLTVL YEVDPGALLK RILPLTIQPL VENAIRHGVM KREEGGTIRL TIQLAGDRVH VEVWDNGVGI REEQLKNLWL SDNSSSERRG VGLANIQRRL KHFCGEELHV TSREGEWTKV QFCFRG
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