| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1567 |
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| Symbol | |
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| ID | 7258536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1671565 |
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| End bp | 1674615 |
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| Gene Length | 3051 bp |
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| Protein Length | 1016 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643561473 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_002458053 |
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| Protein GI | 219667618 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0336431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAA TGCTGATGGC GCTTGTTGCA GTGAGTTTCG GGTGTTTTCT TCTGCTTTTT
GGCCTGTTGG AGACCACGGA TAATAAAGTC CTCAAATCAG AACTATCTCA GCAAGGGGTT
CTGGATTTGC GGGATTGGGA TGCTGCTTCC GATCAGGTTG TTCCCTTGGA CGGACAATGG
GAATTTTATT GGCATCAGCT GCTGGAACCG GGTGGAGAAC CTGATTCCGC GGCAAATGTT
ATTCAAGTTC CGGGTTTTTG GCGAAATGAT ATGGCAACCA GGATTGACCA TGCCAGGGGA
GCCGCTACCT ATCGCCTGAC GATCAAACTG AAGCCTTCGG ATACGGTTTA TGGGCTGAGG
ATTTCCAACA TCCGGATGGC CAGCGCGATC TATGTGAATG GAAATCAGGC GGGGGGGAGC
GGTAAGCCCG CTTTAACCCA GGATGAGTAT CAATACGAGA ATAAGCCGTA TAATGTATTT
TTTCCCGTGC AGGGGGATAC GGCGGAAATT TTGATTCATG TGGCCAACTA TGAAAATAAT
CAGGGAGGGA TTCCCTATCG TCTATATTTC GGCAGTGCCC AAGGCATTCA TACCTTAAAT
ACCAATACGA CGCTGCTTAA TGTGAGCCTG ATTGTGTCCC TGCTCATGCT GGGGTGCTAT
CAGCTGAGTG TCTTTATTAT CCGCAGAGAG GAAAAAGGTC CCCTCTATTT TGGCTTAAGC
TGCGTCGTGA TTGCCTGGTC CTATGCCTCC ACCGGGGACA GGCTCCTGAT TGAGTACTTT
AACCTGCCCA CGGAAATCTA TTATAAGATC CAGGCCATCT CTTTGTACTC TTCCCTGATT
CCCATGGCCA TGTTCATCAA AACCATGTGC AAAGGACTGA TCCCCCGCTG GCTGACCAAG
GGTATTATCT ATGGGATGGG TTTGTATAGC GGTGTTGTCC TTGTCACGCC CTTCCAATGG
TATTCCCCCT TCAATTTATT GTTCAGCTTT ATTCAAATGG CGGCTAACAT CATCATCGTG
GGGCTGTTGC TCTATTCTTT CCGGCAGGGA AGATACGGCG AATTCAACCG GAAAAGCCTG
GGACTCTTTA TCCTGGCCTT GGGCTGCTAT CTTCTGGGTT TAATCGACTA TGGGCTCTAT
CTGAGCAGTG TGGTTCTTGA TTATAAACTA GGATATTATG CGATTTTGAG CTTTTGTTTT
CTGGCTTCGT TCATCATGTC GTACCAATTT TCCGAAGCCT ATAAGACCAT TGAAAGCATG
GCTGCAGAGC TTCAGCAAGC CGACAAGCAA AAAGACGAGT TTTTGCTCCA TACCTCCCAT
GAGTTTCAAA CTCCTCTCCA CGGCATCATC AATTTATCCC AAGCCATGCT GGAGACCGAG
GGGGAACTGA GCGAAAATCA TCTGCAGAAT CTGGCTGTGA TCAGGGACAC CTCCCGAAAG
CTGTCCGCTT TGGTCCGTGA CATTCTGGAC CTGGATAAAA TCAAGCGCAA TGAATTGACG
GTTCATCCGG CTGAGGTCGA TGTCCGGGTG ACCGTTTCCC TGGTCTTTGA TTTACTTAAG
CACTTGATTA CAGCGAAAAA AATCAGGCTG ATCAATAGGG TTCCTGAGGA TTTGCCTTTT
GTTTATGCGG ATGAGAACCG GCTGCGGCAG ATTATCCATA ACCTGGTCGG CAATGCCATG
AAGTTTACCA GTGCGGGAAC GATTGCCATT TCCGCCCAGG TCCTGGAGAA CCATGTGAAA
ATTATGGTTG AGGATACCGG AGTGGGAATT GCCCCATCCG ACTGGGATAC GGTTTTTCAA
CTTTTCGAGC AGGCCCACTC TCCCAATGAG TATGGCGGGA CAGGCTTAGG GCTTTTTATT
TGCCGGAAAT TGGTGCAGAT GATGGACGGG GAAATTTATA TCGATTGGTC CGAGCCGGAG
CGGGGAACCC GGATAGCCTT TACTCTGCCG CTGGCGGCAA AAGATTCGTG CTCTGCCCCG
GCGTCCGTCC GGCCCCCGGA AAAATACCCA ATGGATGAAC CCTGGGGCAG GACGGAGCTG
CCCCAAGGGG GCACGGGCAA GTTCACGCTG CTGGCTGTGG ATGATGATTC GGCCAACCTA
CAGGTCTTAG CCCGCTTATT CGCTAATGAA CCGTATAACG TGCTTTGGGC GACCAATGGG
CTGGAAGCTT TGGAGCTGTT AAAAAGCCGT TCGGATATCG ATTTGGTTCT GCTGGATGTG
ATGATGCCCA GAATGTCAGG CTATGAGGTG TGCCGGGAGA TCAGGCGGCA GTTTTCCCTG
TTTGAATTGC CGGTTATCTT ATTGACAGTG CGTCATTCTC CGGGCGATAT CGCGGCGGGC
TTTAAGGCCG GGGCTAATGA TTTTATGATC AAGCCTTTCG ACGCCCTGGA GGTACGGGCC
AGGACCGAAA CCCTCCTGCA GCTGAAACAG TCGGTTGCAG CCGCCTTGAA GGCCGAAATG
GATTTTCTCC AATCACAGAT TAAGCCCCAC TTCCTGTTCA ACGCGCTAAA CGCCATTATC
ACCTTATGCG GGACGGATGG GCTGCGGGCG GAGCAGCTGA TAACCCATTT GAGCTATTAC
TTAAGGCGAT GCTTTGAGCC CCGGACGGAT AGTTTCTTGC TTTTGCAGGA TGAACTCCGG
CTGGTGGAAG CCTATGTGGA AATTGAAAAG GCCAGATTTG AGGACCGCCT TACTGTGTTG
TATGAGGTTG ATCCGGGCGC TTTGCTGAAG AGGATCCTGC CTCTCACCAT CCAGCCTTTG
GTGGAGAATG CCATCCGCCA CGGGGTGATG AAGCGTGAGG AGGGGGGAAC CATCCGTCTG
ACCATCCAAT TGGCAGGGGA TAGGGTTCAC GTTGAAGTGT GGGACAATGG GGTGGGAATA
AGAGAAGAGC AATTAAAGAA TTTGTGGCTG AGCGATAACT CCTCTTCCGA GAGGCGGGGA
GTGGGGCTGG CCAATATCCA GCGACGGTTG AAGCACTTCT GCGGGGAAGA ATTGCATGTA
ACCAGTCGGG AAGGAGAATG GACCAAGGTT CAGTTTTGTT TCCGAGGGTG A
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| Protein sequence | MRKMLMALVA VSFGCFLLLF GLLETTDNKV LKSELSQQGV LDLRDWDAAS DQVVPLDGQW
EFYWHQLLEP GGEPDSAANV IQVPGFWRND MATRIDHARG AATYRLTIKL KPSDTVYGLR
ISNIRMASAI YVNGNQAGGS GKPALTQDEY QYENKPYNVF FPVQGDTAEI LIHVANYENN
QGGIPYRLYF GSAQGIHTLN TNTTLLNVSL IVSLLMLGCY QLSVFIIRRE EKGPLYFGLS
CVVIAWSYAS TGDRLLIEYF NLPTEIYYKI QAISLYSSLI PMAMFIKTMC KGLIPRWLTK
GIIYGMGLYS GVVLVTPFQW YSPFNLLFSF IQMAANIIIV GLLLYSFRQG RYGEFNRKSL
GLFILALGCY LLGLIDYGLY LSSVVLDYKL GYYAILSFCF LASFIMSYQF SEAYKTIESM
AAELQQADKQ KDEFLLHTSH EFQTPLHGII NLSQAMLETE GELSENHLQN LAVIRDTSRK
LSALVRDILD LDKIKRNELT VHPAEVDVRV TVSLVFDLLK HLITAKKIRL INRVPEDLPF
VYADENRLRQ IIHNLVGNAM KFTSAGTIAI SAQVLENHVK IMVEDTGVGI APSDWDTVFQ
LFEQAHSPNE YGGTGLGLFI CRKLVQMMDG EIYIDWSEPE RGTRIAFTLP LAAKDSCSAP
ASVRPPEKYP MDEPWGRTEL PQGGTGKFTL LAVDDDSANL QVLARLFANE PYNVLWATNG
LEALELLKSR SDIDLVLLDV MMPRMSGYEV CREIRRQFSL FELPVILLTV RHSPGDIAAG
FKAGANDFMI KPFDALEVRA RTETLLQLKQ SVAAALKAEM DFLQSQIKPH FLFNALNAII
TLCGTDGLRA EQLITHLSYY LRRCFEPRTD SFLLLQDELR LVEAYVEIEK ARFEDRLTVL
YEVDPGALLK RILPLTIQPL VENAIRHGVM KREEGGTIRL TIQLAGDRVH VEVWDNGVGI
REEQLKNLWL SDNSSSERRG VGLANIQRRL KHFCGEELHV TSREGEWTKV QFCFRG
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