Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1562 |
Symbol | |
ID | 7258531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1667637 |
End bp | 1668446 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643561468 |
Product | Abortive infection protein |
Protein accession | YP_002458048 |
Protein GI | 219667613 |
COG category | [R] General function prediction only |
COG ID | [COG1266] Predicted metal-dependent membrane protease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000000889795 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACAATA AATCATACCG AAAAGTGCCC AAAGGTAATA AGAAAGATAA GTATAAAGAT AAGGATAAAA ATAAAGATAA AATTCAAGAT AAAAATAAAA AAGAAACGGT AAATAAAGAG GATAGCAGAA TCCCTCCCCG TCATCCGGTA TGGAATGTTT GGCAAGGGCT TTTTCTGCTG CTCATTATCT ATGGAATTGA ATTCTTTCTC GGTTGGCTTA GAACTCCTAA GGATTTAGAT CAATTAGAGG GGTTCTTTCG CTTTTTGACC GTGGGAATGG GTGAGGCTCT GCTTTACCTT ATCATCATTT TATGTTTTTT TAAGCTCATC CGCCGTCCTC TCAGAGAGTT AGGCCTGGTC AGACCTCATG TTCGCTATAT TCTACTGGGG CTGATGATGG GAGTTTTTCT CCTGGTGGTC GTAGGGCTGA TCGGGAATTT CCTGGCCAAC AAATTAGGAA CACCTGCGCC CCAAAGCTTC ACCCTCGTGC TTATGGGTGC TCAATACGAT TGGCAGCTGA TGCTGCTTAT TATCCTGGGC GGCATGATTG CTCCGATCAA GGAAGAGGTT TTTTTTCGGG GAATTTTTTA TCCACCCTTT CGCCAAGGCT ATGGCAGGGG TAAAGGGATT CTTTTTACGG CGGGGCTTTT CGCTTTGCTG CATTTTGATG TTCTGCGCTT TATTCCCTTA CTGGTGGGGG GAGTCGTTTT AACCTGGCTC TACGAAAAGA CCGGCAGCCT CTGGCCTTCG ATTATCGCCC ATGGCACCTG GAATACGCTC ATGGCTTTAA TGGTGTGGAT ACAACGGTAG
|
Protein sequence | MDNKSYRKVP KGNKKDKYKD KDKNKDKIQD KNKKETVNKE DSRIPPRHPV WNVWQGLFLL LIIYGIEFFL GWLRTPKDLD QLEGFFRFLT VGMGEALLYL IIILCFFKLI RRPLRELGLV RPHVRYILLG LMMGVFLLVV VGLIGNFLAN KLGTPAPQSF TLVLMGAQYD WQLMLLIILG GMIAPIKEEV FFRGIFYPPF RQGYGRGKGI LFTAGLFALL HFDVLRFIPL LVGGVVLTWL YEKTGSLWPS IIAHGTWNTL MALMVWIQR
|
| |