Gene Dhaf_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1562 
Symbol 
ID7258531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1667637 
End bp1668446 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content45% 
IMG OID643561468 
ProductAbortive infection protein 
Protein accessionYP_002458048 
Protein GI219667613 
COG category[R] General function prediction only 
COG ID[COG1266] Predicted metal-dependent membrane protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000889795 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAATA AATCATACCG AAAAGTGCCC AAAGGTAATA AGAAAGATAA GTATAAAGAT 
AAGGATAAAA ATAAAGATAA AATTCAAGAT AAAAATAAAA AAGAAACGGT AAATAAAGAG
GATAGCAGAA TCCCTCCCCG TCATCCGGTA TGGAATGTTT GGCAAGGGCT TTTTCTGCTG
CTCATTATCT ATGGAATTGA ATTCTTTCTC GGTTGGCTTA GAACTCCTAA GGATTTAGAT
CAATTAGAGG GGTTCTTTCG CTTTTTGACC GTGGGAATGG GTGAGGCTCT GCTTTACCTT
ATCATCATTT TATGTTTTTT TAAGCTCATC CGCCGTCCTC TCAGAGAGTT AGGCCTGGTC
AGACCTCATG TTCGCTATAT TCTACTGGGG CTGATGATGG GAGTTTTTCT CCTGGTGGTC
GTAGGGCTGA TCGGGAATTT CCTGGCCAAC AAATTAGGAA CACCTGCGCC CCAAAGCTTC
ACCCTCGTGC TTATGGGTGC TCAATACGAT TGGCAGCTGA TGCTGCTTAT TATCCTGGGC
GGCATGATTG CTCCGATCAA GGAAGAGGTT TTTTTTCGGG GAATTTTTTA TCCACCCTTT
CGCCAAGGCT ATGGCAGGGG TAAAGGGATT CTTTTTACGG CGGGGCTTTT CGCTTTGCTG
CATTTTGATG TTCTGCGCTT TATTCCCTTA CTGGTGGGGG GAGTCGTTTT AACCTGGCTC
TACGAAAAGA CCGGCAGCCT CTGGCCTTCG ATTATCGCCC ATGGCACCTG GAATACGCTC
ATGGCTTTAA TGGTGTGGAT ACAACGGTAG
 
Protein sequence
MDNKSYRKVP KGNKKDKYKD KDKNKDKIQD KNKKETVNKE DSRIPPRHPV WNVWQGLFLL 
LIIYGIEFFL GWLRTPKDLD QLEGFFRFLT VGMGEALLYL IIILCFFKLI RRPLRELGLV
RPHVRYILLG LMMGVFLLVV VGLIGNFLAN KLGTPAPQSF TLVLMGAQYD WQLMLLIILG
GMIAPIKEEV FFRGIFYPPF RQGYGRGKGI LFTAGLFALL HFDVLRFIPL LVGGVVLTWL
YEKTGSLWPS IIAHGTWNTL MALMVWIQR