Gene Dhaf_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1560 
Symbol 
ID7258529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1664295 
End bp1665959 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content47% 
IMG OID643561466 
ProductABC transporter related 
Protein accessionYP_002458046 
Protein GI219667611 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000046751 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGTAT TTGTGCTATA CTCTTATGAT GTATGCAAAT ACAAAAATAA AGATCATAAA 
GGCGGGCATA AATTGATTAG TGTTAATAAC GTGAGCTTAA GATATGGCGG GCGGAAGCTC
TTTGAAGATG TCTCTTTGAA ATTCACTCCA GGTAATTGTT ATGGCGTGAT TGGCGCTAAC
GGTGCCGGAA AAAGCACTTT TCTCAAAATT CTTTCGGGAG AAGTTGAGCC GAACTCCGGG
GATGTGACCA TCGCGCCGGG AGTCCGGCTA TCGATGCTCA AGCAGGATCA TTACCAGTAT
GATCAGTATA CGGTTTTAGA TACGGTCATT ATGGGCAACC AGCGGCTTTA TGCCATCATG
AAGGAGAAGG AAGTCCTCTA CGGGAAAGCT GATTTTACCG ATGAGGACGG AATCAAGGCT
GCGGAGCTGG AGCATGAATT CGGAGAGATG AACGGCTGGG AAGCGGAGTC CGAAGCCTCG
ACTCTTTTAC AAGGTTTAGG CATCGGCACA GAATTGCATG AGAAGGCTAT GTCTGAACTG
ACCGGTGTGG AAAAGATTAA GGTGCTTCTG GCTCAGGCTC TTTTCGGCAA TCCCGGCATC
CTCATTTTGG ACGAGCCCAC CAACCATTTG GATATCCAAT CCATCCGCTG GCTGGAGGAG
TTTTTGATTG GATTTGAGGG AACGGTCATC GTCGTTTCCC ATGACAGGCA TTTTCTCAAT
AAGATTTGTA CCCATATGGC GGATGTGGAC TTTGGCAAGA TCAAGCTTTA TGTGGGCAAT
TATGATTTCT GGTATGAATC CAGTCAGTTA GCCCTGCAAA TGACCCGGGA TCTTAACAAA
AAGAAAGAAG AAAAGGCCAA ACAGCTTAAG GAGTTTATCG CCCGCTTCAG CGCCAATGCC
TCCAAATCCA AACAGGCCAC TTCCCGGAAA AAGATGCTGG ATAAGCTGAA TATCGAAGAT
ATTGAACCTT CCAACCGCAA ATATCCCTAT GTAGGCTTTA AACCGGAGCG GGAAGTGGGC
AATGATATCC TGACGGTAGA AGGTTTGACC AAAACCATCG ATGGAGTTAA GGTCTTGGAT
AATGTCAGCT TTATTCTGAG CAAAGGGGAT AAAGTTGCCT TGGTAGGCAC CAATGAAGGG
GCCTATACCG CTCTGCTCCA GATATTGGCC GGAGAAATGG AGCCGGACAG CGGCAGCTAT
AAATGGGGCG TCACCATTAC CAAGGCCTAT TTCCCCAAGG ATAACACAGA GTATTTTCAG
GATGTGGACT TGAGCCTGGT GGATTGGCTG CGGCAGTTTT CCGCGGATAA AACCGACACC
TATGTCCGTG GTTTTCTGGG CAAGATGCTC TTTTCCGGGG AAGAAGCCCT GAAATCCCTT
AAAGTCCTTT CCGGCGGCGA GCGGGTCAGG TGCATGCTGG CTAAAATGAT GCTGAGTCAG
GCCAATGTGC TTCTTTTGGA CCAGCCCACC AATCACTTGG ATCTGGAATC CATCACAGCC
CTGAACAATG GGCTGACGGA TTATAAAAGC AATATTATCT TTACCTCCCA TGACCATCAA
TTCATCCAGA CCATTGCCAA CCGCATTATT CAGATCACTC CTGAAGAGAT GCTGGATGTT
CGGTTGAGCT ATGATGAGTT TCTGGATAAC CTGGCGATTG GATAA
 
Protein sequence
MIVFVLYSYD VCKYKNKDHK GGHKLISVNN VSLRYGGRKL FEDVSLKFTP GNCYGVIGAN 
GAGKSTFLKI LSGEVEPNSG DVTIAPGVRL SMLKQDHYQY DQYTVLDTVI MGNQRLYAIM
KEKEVLYGKA DFTDEDGIKA AELEHEFGEM NGWEAESEAS TLLQGLGIGT ELHEKAMSEL
TGVEKIKVLL AQALFGNPGI LILDEPTNHL DIQSIRWLEE FLIGFEGTVI VVSHDRHFLN
KICTHMADVD FGKIKLYVGN YDFWYESSQL ALQMTRDLNK KKEEKAKQLK EFIARFSANA
SKSKQATSRK KMLDKLNIED IEPSNRKYPY VGFKPEREVG NDILTVEGLT KTIDGVKVLD
NVSFILSKGD KVALVGTNEG AYTALLQILA GEMEPDSGSY KWGVTITKAY FPKDNTEYFQ
DVDLSLVDWL RQFSADKTDT YVRGFLGKML FSGEEALKSL KVLSGGERVR CMLAKMMLSQ
ANVLLLDQPT NHLDLESITA LNNGLTDYKS NIIFTSHDHQ FIQTIANRII QITPEEMLDV
RLSYDEFLDN LAIG