Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1544 |
Symbol | |
ID | 7258513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1647996 |
End bp | 1649078 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643561450 |
Product | periplasmic binding protein |
Protein accession | YP_002458030 |
Protein GI | 219667595 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTGA AAAGAAAAAT TCTTGCCCTG CTTATGGCGG CTCTGCTTGC TGTGAGCCTG GCCGGCTGCG GACAAACCAG CCAGGCCCCT GCCAATCCAC CGGCTGCACC AGAGGCCAGC ACTCCAACTG AACGCACAGT CACCGATATG GCCGGACGCA CAGTGACTCT GCCTGCTGAA GTTAAAACTG TAGGAACCTT CGGCTCCATC GGCGTTCTTA ACGCCTTTGT GGAAACCCTG AGCGCAGGGG AAAGACTCGC CAACGAAGGC TCCCCATCCT TTGTCAAAAG CCCCACCTGG GAAAAATATC AGTACCAATT CACACCTCAT ATCAAGAATC TGAAACCTTT CCAAGGTGCG GACAACGAAC TGCTGATGGA AAATATCCTG GCCGCCAAAC CGGATGTTTG CCTGACCATG AGTACCGACC TGACCGAACA GCTGGAAAAG CAAGGACTCA ATGTGGTTCA GCTTTCCTGG ACGAAGACCG AAGATGTCAA AGAATGCATC ACTCTCCTGG GCGAAGTGCT CAACCAGCAG GAAGTTGCCG CCGATTATCT GAAATACTTC GATGATATGT TGGCCAAAAC GGCAGACCTG ACCAAAGATA TTAAGGATGC CGATAAGAAA ACCGTGGTTT ATGGCAACGT GAGCAAATTC TCCCAACCCC ATGTGATCGC CGAATGGTGG ATTGATAAAG CCGGCGGCAT CAGCGTGACC AGCGAGGCTA TGACGAAAGC GAATAAAGAA TCCCTGACCT ATACTCTGGA GGATTTGCTG AAGTGGAATC CGGATGTGAT GTTCGTAGCC AGCGCCGCCG AGAAGAAAGA CGTCCTGGCA GACGCCCGTT TGGGTGAGAT TACCGCTGTC AAGAACGGCG CCATCTATAT CGTCCCCCGC ATTGCTCATG TCTGGGGCAA CCGCACCACC GAACAGCCCC TGACCATTAT GTGGGCTATG AACAAACTCT ATCCCGAGAT CGTAACGGAC AGCCAGCTGG CGGAAGATAT CTCCTACTTC TACAGCCACT TCTTCAAATA CGATTTCAAT GCTGACCAGC TTAAGGAGAT TATGGGCCAA TAA
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Protein sequence | MKLKRKILAL LMAALLAVSL AGCGQTSQAP ANPPAAPEAS TPTERTVTDM AGRTVTLPAE VKTVGTFGSI GVLNAFVETL SAGERLANEG SPSFVKSPTW EKYQYQFTPH IKNLKPFQGA DNELLMENIL AAKPDVCLTM STDLTEQLEK QGLNVVQLSW TKTEDVKECI TLLGEVLNQQ EVAADYLKYF DDMLAKTADL TKDIKDADKK TVVYGNVSKF SQPHVIAEWW IDKAGGISVT SEAMTKANKE SLTYTLEDLL KWNPDVMFVA SAAEKKDVLA DARLGEITAV KNGAIYIVPR IAHVWGNRTT EQPLTIMWAM NKLYPEIVTD SQLAEDISYF YSHFFKYDFN ADQLKEIMGQ
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