Gene Dhaf_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1544 
Symbol 
ID7258513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1647996 
End bp1649078 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content52% 
IMG OID643561450 
Productperiplasmic binding protein 
Protein accessionYP_002458030 
Protein GI219667595 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGA AAAGAAAAAT TCTTGCCCTG CTTATGGCGG CTCTGCTTGC TGTGAGCCTG 
GCCGGCTGCG GACAAACCAG CCAGGCCCCT GCCAATCCAC CGGCTGCACC AGAGGCCAGC
ACTCCAACTG AACGCACAGT CACCGATATG GCCGGACGCA CAGTGACTCT GCCTGCTGAA
GTTAAAACTG TAGGAACCTT CGGCTCCATC GGCGTTCTTA ACGCCTTTGT GGAAACCCTG
AGCGCAGGGG AAAGACTCGC CAACGAAGGC TCCCCATCCT TTGTCAAAAG CCCCACCTGG
GAAAAATATC AGTACCAATT CACACCTCAT ATCAAGAATC TGAAACCTTT CCAAGGTGCG
GACAACGAAC TGCTGATGGA AAATATCCTG GCCGCCAAAC CGGATGTTTG CCTGACCATG
AGTACCGACC TGACCGAACA GCTGGAAAAG CAAGGACTCA ATGTGGTTCA GCTTTCCTGG
ACGAAGACCG AAGATGTCAA AGAATGCATC ACTCTCCTGG GCGAAGTGCT CAACCAGCAG
GAAGTTGCCG CCGATTATCT GAAATACTTC GATGATATGT TGGCCAAAAC GGCAGACCTG
ACCAAAGATA TTAAGGATGC CGATAAGAAA ACCGTGGTTT ATGGCAACGT GAGCAAATTC
TCCCAACCCC ATGTGATCGC CGAATGGTGG ATTGATAAAG CCGGCGGCAT CAGCGTGACC
AGCGAGGCTA TGACGAAAGC GAATAAAGAA TCCCTGACCT ATACTCTGGA GGATTTGCTG
AAGTGGAATC CGGATGTGAT GTTCGTAGCC AGCGCCGCCG AGAAGAAAGA CGTCCTGGCA
GACGCCCGTT TGGGTGAGAT TACCGCTGTC AAGAACGGCG CCATCTATAT CGTCCCCCGC
ATTGCTCATG TCTGGGGCAA CCGCACCACC GAACAGCCCC TGACCATTAT GTGGGCTATG
AACAAACTCT ATCCCGAGAT CGTAACGGAC AGCCAGCTGG CGGAAGATAT CTCCTACTTC
TACAGCCACT TCTTCAAATA CGATTTCAAT GCTGACCAGC TTAAGGAGAT TATGGGCCAA
TAA
 
Protein sequence
MKLKRKILAL LMAALLAVSL AGCGQTSQAP ANPPAAPEAS TPTERTVTDM AGRTVTLPAE 
VKTVGTFGSI GVLNAFVETL SAGERLANEG SPSFVKSPTW EKYQYQFTPH IKNLKPFQGA
DNELLMENIL AAKPDVCLTM STDLTEQLEK QGLNVVQLSW TKTEDVKECI TLLGEVLNQQ
EVAADYLKYF DDMLAKTADL TKDIKDADKK TVVYGNVSKF SQPHVIAEWW IDKAGGISVT
SEAMTKANKE SLTYTLEDLL KWNPDVMFVA SAAEKKDVLA DARLGEITAV KNGAIYIVPR
IAHVWGNRTT EQPLTIMWAM NKLYPEIVTD SQLAEDISYF YSHFFKYDFN ADQLKEIMGQ