Gene Dhaf_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1542 
Symbol 
ID7258511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1646160 
End bp1647182 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content54% 
IMG OID643561448 
Producttransport system permease protein 
Protein accessionYP_002458028 
Protein GI219667593 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGATCA GAAACAGTGA ATATTTTGGT GTCAAGATCC TGCTCCTGGT AGCTTTAACA 
GTGGCATTGT TTTTCGGCTC CTTTCTGGTG GGACGCTATC CGATTCCCCC CCAGACGGTC
ATGGATATCA TCCTCTCCCA ATTTTTACCC ATCCCCCAAT ACTGGGATTC TACCCTGGAA
ACGGTGGTTA TGCAGGTACG CTTGCCCAGG ATTGCCCTCG GTATTCTGGT GGGAGGGGCC
CTGTCCGTTT CCGGTGCTTC TTACCAGACC CTGTTTAAGA ACCCTATGGT CTCGCCGGAT
CTGCTGGGCG TGTCGGCGGG GGCGGGCTTC GGAGCGGCTC TGGCCATGAT CAATGATGGT
TCATGGTGGC AGATCCAGAC CACGGCCTTT ACTTTTGGCA TGATCGCCGT TATAGCCGCC
TATATCATCG CTTATGTCTT CGGGAGGCAG ACGATTACGA TCCTGATTCT GGGCGGGGTT
GTGGTTTCCA GCTTGTTTCA GTCTTTGATT TCTATTATCA AGACCTTAGC CGATACGGAA
AACCAATTGC CGGCCATTAC CTTTTGGCTG ATGGGGGGCT TGGGCAAAGG GGCCAATCAG
GATGTGATGC TGATGCTGCC GGCCATGGTG CTTTCCCTGG CGCTGCTCTT CCTGTTTCGC
AATCAAATCA ATGCTCTGGC TGCCGGGGAG GATGAGGCGG CCACCATGGG GGTCAATGTG
CCCCTGGTCA AGCTGATAGT CATCTGCAGC TCCACCCTGA TGACGGTTTG CTCCGTCAGT
ATCTGCGGTA TTATCGGCTG GGTGGGCATG GTCGTCCCCC ATATTGCCCG GATGCTTACC
GGTGCCAATT ACTCTAAGTT GGTGGCCACA TCCTTCTTTA TCGGCGGGGT TTTTCTGCTC
CTGATCGATA ATATCATCCG CGGTGTGGAA GGGGTTGAAC TCCCCCTCGG CGTACTGACA
GCTTTGGTGG GTACTCCCGT CTTTGTCCTC CTGCTGTCCA GAGTGAAAAA GGGGTGGTCC
TGA
 
Protein sequence
MKIRNSEYFG VKILLLVALT VALFFGSFLV GRYPIPPQTV MDIILSQFLP IPQYWDSTLE 
TVVMQVRLPR IALGILVGGA LSVSGASYQT LFKNPMVSPD LLGVSAGAGF GAALAMINDG
SWWQIQTTAF TFGMIAVIAA YIIAYVFGRQ TITILILGGV VVSSLFQSLI SIIKTLADTE
NQLPAITFWL MGGLGKGANQ DVMLMLPAMV LSLALLFLFR NQINALAAGE DEAATMGVNV
PLVKLIVICS STLMTVCSVS ICGIIGWVGM VVPHIARMLT GANYSKLVAT SFFIGGVFLL
LIDNIIRGVE GVELPLGVLT ALVGTPVFVL LLSRVKKGWS