Gene Dhaf_1532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1532 
Symbol 
ID7258501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1633737 
End bp1634699 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content48% 
IMG OID643561440 
ProductRNA-directed DNA polymerase 
Protein accessionYP_002458020 
Protein GI219667585 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAGTC CAATCACAGT ATTAAAAAGT TTGACTGAAA AATCCAAGGA TGAATCGTAC 
AAATTCCAGC GGCTATACCG GAACTTGTAC AACCCCGAAT TTTACTGGCT GGCCTACCAG
AACATCTATG CTAATAAAGG CAGTATGACG CCGGGGATGG ACGGTACAAC CATAAGTGGA
ATTAACGAAG AACGCATCAG GCAAATCATC GCATCCCTAA AAGACCAAAG CTATCAACCG
CACCCAGCGC GAAGAGTGTA CATCGAGAAA AAGAACAGCC AAAAGAAAAG GCCCCTCGGC
ATATCCACCG CCAATGACAA ACTTGTGCAA GAAGTTGTCC GAATGATTCT TGAGAGCATT
TTTGAGCCAA CGTTCTCGGA TAAATCGCAC GGATTCCGAC CGGTACGGAG CTGCCAAACG
GCGCTGCTGC AGATACAAGG GAACTTCACG GGTGTAAACT GGTTCGTTGA GGGCGACATC
GAAGCCTGCT TCGACAGCTT TGACCACCAC GTATTAATTG AGCTTCTCCA ACGGCGTATT
GACGATGCAT CATTCATATC GCTAATGTGG AAGTTCCTCA AAGCAGGGTA CATGGAACAA
TGGGAATACA ACATGACTTA CGACGGTGTC CCCCAAGGGT CGGGCATCAG CCCCATCTTG
TCAAACATAT ATCTCAGCGA ACTGGATACG TTTATGAGTG AGTACAAAGC CGCCTTTGAC
ATCCGAAAAA CGCACGGACG AAAACCAAGT AGCAATTACT GCCACGCCCG GTACATGGCC
AGCAAATACC GTAAAGAATC ACGGGCAATC TGGGGCAACC TGACCCCCAG CGAGAAAAAG
AGCCGCATGA AAGAACAAAG GGCGCTGTCA GTGAAACAAC GTGAAACGCC AGCACACGAT
GTATTCGATG ATACATTCAA AATTATTCAA TACGCACGTT ATGCTGACGG CGTGCGCCCG
TAA
 
Protein sequence
MRSPITVLKS LTEKSKDESY KFQRLYRNLY NPEFYWLAYQ NIYANKGSMT PGMDGTTISG 
INEERIRQII ASLKDQSYQP HPARRVYIEK KNSQKKRPLG ISTANDKLVQ EVVRMILESI
FEPTFSDKSH GFRPVRSCQT ALLQIQGNFT GVNWFVEGDI EACFDSFDHH VLIELLQRRI
DDASFISLMW KFLKAGYMEQ WEYNMTYDGV PQGSGISPIL SNIYLSELDT FMSEYKAAFD
IRKTHGRKPS SNYCHARYMA SKYRKESRAI WGNLTPSEKK SRMKEQRALS VKQRETPAHD
VFDDTFKIIQ YARYADGVRP