Gene Dhaf_1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1528 
Symbol 
ID7258497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1630267 
End bp1631436 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content46% 
IMG OID643561436 
Producthistidine kinase 
Protein accessionYP_002458016 
Protein GI219667581 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCAGG AAGAGGGTGA TGGCTTGAGA CCAGATGGAT TGAGACCAGA TGGATTGAGA 
CCAGATAGAA AGTTTCATAA ATTGTATCAT GAGGAGTTTC ATAAGGGCAG GCAGCACGGG
GAATTTCGGG AATTGCGCAG GTCCATGAAG TTTCTGCGCC CGGTCGGAGT CCTTTTGAAT
TTGCTTCTTT TATACCTGCT CTTTCAATGG ATCGGGCTCA AAGCCATTGC TGTATTTTTT
GCCTTGATCC TCATCACCCG GGAAATACTC CAGCTCGGTT TTTTCCGGCG TCTGGAGAAG
AGGGTCTTTA AACCGATGGA ACAATTGAAG CAGGGCTTTG ATGAAATCGC CAAAGGAAAT
TATCAGGTGT CAATTGAGCC GGAAGTCGAA AATGAATTCA CGCAGCTGAT TTACGCTTTT
AATGAAATGG CTTTTAAACT GCAGGAAAGC GAAAGAAGCA ATCAGGAGTA TGAGAAAAAC
AGAAAGACTC TGGTGGCCAA CATCTCCCAT GATCTAAAAA CGCCGATTAC CTCGATCCAG
GGCTATCTGG AAGTAATTCT TGAGGGGTGC GTCGGCGAAC CGGAAAAAAT AAAGCGTTAC
CTGGAGACGA TTTACAGCAA TACTGCCTAT ATGAATAAGC TGATTGACGA TCTGTTTTTA
TTTTCCAAGC TGGATCTGGA CAAAGTGGCG ATGAATTATG AAGTCCTGAG CATAGGCGCT
TATCTGGACG ATTTGGCCAC CGAGTTAAAA TTTGAGTTTG AAGAAAGGCA ATTCAAGTTT
TTCTATCAGA ACAGAACGGA CCGGGACTAT GCGGTCACTA TTGATGGGAA ACGGGTGTAT
CAAGGGATCC GCAATATCAT CGATAATGCC ATGAAGTATG GGCCGGAGCA GGATTTAAAG
GTGACAATGG AGCTATATGT TCAGGAAGAT GATATCTGCA TCGACATTGC CGACAATGGC
CCGGGAATTC CGGAAGAGCA GCTGCCCCAT ATTTTTAACC GCTTTTACCG GCTTGACACG
GAACGCTCCA AAGATTTCAC AAGTACGGGA CTGGGTTTGG CCATAGCCAA AGAGTTGATT
GAAGCCCAGG GGGGCACGAT CTCAGCTGCC AGTACAGACA GGGCCGGCTC CCGCTTTACC
ATAAAGCTGC CTATTAGTAA ATCATCTTAA
 
Protein sequence
MFQEEGDGLR PDGLRPDGLR PDRKFHKLYH EEFHKGRQHG EFRELRRSMK FLRPVGVLLN 
LLLLYLLFQW IGLKAIAVFF ALILITREIL QLGFFRRLEK RVFKPMEQLK QGFDEIAKGN
YQVSIEPEVE NEFTQLIYAF NEMAFKLQES ERSNQEYEKN RKTLVANISH DLKTPITSIQ
GYLEVILEGC VGEPEKIKRY LETIYSNTAY MNKLIDDLFL FSKLDLDKVA MNYEVLSIGA
YLDDLATELK FEFEERQFKF FYQNRTDRDY AVTIDGKRVY QGIRNIIDNA MKYGPEQDLK
VTMELYVQED DICIDIADNG PGIPEEQLPH IFNRFYRLDT ERSKDFTSTG LGLAIAKELI
EAQGGTISAA STDRAGSRFT IKLPISKSS