Gene Dhaf_1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1504 
Symbol 
ID7258473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp1599098 
End bp1600198 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content43% 
IMG OID643561412 
ProductApbE family lipoprotein 
Protein accessionYP_002457992 
Protein GI219667557 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00453066 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAATC TAAGACCGTC ATCCTTCAAA TCTCGGCTGC TTGTGATGTT AATTTGTGTA 
TGTTTAAGCT TTTCCCTGGT GGGATGCTTG TCTGCAGAGA CCAAGGTGAA GGAATTTGAA 
CCTGTCGTCG AAACAACTTT TTTGATGGGA ACAGTGGCCA AGATTACCAT CTACGATGAG 
ATAAAAGATA ACGAAATCTT TCAGAGGGTT TTTGATCGTC TCACCGATAT TGAGCAAAGA 
ATGACGATTA ATGATGACTA TCCGAACAGT GAGATAATCC AGTTGAATAA AGCTTCCGGT 
AAGGAGTTTG TGAAAATAAA CCCCGATACA TTTTATGTTT TAGAGAAAGC AAAATATCTC 
GCTGAGCTTT CGCAAGGAAA ATTCGATATC ACTGTCGGTC CCATTGTCAA GCTTTGGAAT 
ATCGGCTCGG ATAATGCCCG GGTTCCTGGT ATTGATGAAA TAAATAAAAA GCTGCCTTTG 
GTGGATTATC ATAATCTTAT TCTCGATAAA GACAATTCCA GTGCTAAGCT GAACCAAGAG 
GGTATGGTGG TGGATTTAGG AGCTATCGCT AAAGGGTATG CTGCGGATGA GGCGGTAAAG 
ATCCTCAAAG AGGCCGGGAT CGAACACGCC ATTGTTAATC TTGGCGGCAA TATTGTGGCG 
ATGAATACTA AACTCGATGG CTCCCTTTGG CGGCTTGGTT TGCAGGATCC TTATGAAATC 
AGGGGTAAAT CCATGGGCGT GGTTCTGCTC AATGACCAGA CCATGGTCTC ATCCGGGACC 
TATGAACGGT ACTTCGAAGA AGGTGGTAAA GTTTATCATC ACCTGATTGA TCCGGATACA 
GGCTATCCTG GGGAAAATGG GTTGATCAGT GTTTCCATCA TTACGAAAGA ATCTATTAAT 
GCTGATGGCT TATCCACCGG AACCTTCCTG CTGGGCCTTG AGGAAGGTAT GAAAATGATT 
GAAAAGATTC CTGATACGGA AGCGATATTC ATCACCGCCG ATAAGAAGGT ATATGTAACG 
TCAGGCATCA ACAGCTCCAA CTTTGAAATC ACCAACCCTG ATTATCATCT GCAGACGACA 
CCTTCCCCAG AAAGCAAATG A
 
Protein sequence
MQNLRPSSFK SRLLVMLICV CLSFSLVGCL SAETKVKEFE PVVETTFLMG TVAKITIYDE 
IKDNEIFQRV FDRLTDIEQR MTINDDYPNS EIIQLNKASG KEFVKINPDT FYVLEKAKYL 
AELSQGKFDI TVGPIVKLWN IGSDNARVPG IDEINKKLPL VDYHNLILDK DNSSAKLNQE 
GMVVDLGAIA KGYAADEAVK ILKEAGIEHA IVNLGGNIVA MNTKLDGSLW RLGLQDPYEI 
RGKSMGVVLL NDQTMVSSGT YERYFEEGGK VYHHLIDPDT GYPGENGLIS VSIITKESIN 
ADGLSTGTFL LGLEEGMKMI EKIPDTEAIF ITADKKVYVT SGINSSNFEI TNPDYHLQTT 
PSPESK