Gene Dhaf_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1499 
Symbol 
ID7258468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp1594204 
End bp1595346 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content48% 
IMG OID643561407 
ProductApbE family lipoprotein 
Protein accessionYP_002457987 
Protein GI219667552 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000000000152679 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTACAGA GTGCTAGGCT GGTCACTATA AGCAATAAAG AGGGTTTAGA GATAAAGGAG 
CTGGAGTTGT TGTTTGACAA GAAAAAGTGC GGAAGAAAAA AACTATCGTT TGTAGCAGTT 
GCCTTGATAA CACTGGGACT ACTGACTGCA TGCAATGGGA AACCTGTACA ACAGGAAGAA 
GTTAAGAAGT TTGAAAGCAC GGATATTGCC ATGGGTACGG TAATATCGCA AAGAGTCTTT 
GGCGATAATG GACAGGCTGC CATCGACGCA GCACTGGAGA AGATAAAGAG TTTGGAAGCA 
CTTTTGACCT TCAATGCTCC AGGAGGAGAC GTTAATAAAC TCAATGATTA TGCCGGGAAG 
CAAAGTGTAG AACTCCAGCC GGAGACCTTG CTTGTCTTGA AAGAATCTCA GGAAGTAGCT 
GAACTCAGCG GCGGAGCCTT TGACGTGACT GTGGGTCCCA TCGTGAAAAG CTGGGGGATT 
GGTACGGACA ATGCCCGGAT TCCTTCTGAG ACAGAATTGA AAGAGCTGCT GCCTCTTGTT 
AATTATAAAA ATCTGCTTAT TGAGGGAAAC ACAGCCTATC TTAAACAAGC AGGCCAGATG 
GTGGACCTGG GTGGTATTGC CAAAGGGTAC GCCGGAGATG CGGCTATTGA AGTCTATAAA 
AAGCAAGGCA TCACCTCAGC TTTTATCAAC CTCGGCGGTA ATGTGGTGAC CTTGGGGACT 
AAGCCGGATG GCAGCTCCTG GACCGTAGGG GTGCGTAACC CTCGTCCTGC CGGTGAAGAG 
GATCAGATCG TGGGTATGAT TACTGTGGCG GATAAAGCGG TTGTGACGGC CGGTGATGAT 
CAGCGCTATT TTGAAGTAGA CGGGGTGCGC TACCACCATA TTCTCAATCC TCACACAGGC 
TATCCGGCCC AATCGGATTT GATGAGCGTC ACCTTGGTGA CGGATTCCTC TTTGCTGGCT 
GATGCTCTGG ATACGGCAGT ATATATTCTC GGTTTGGAAA AAGGCCGGGA GATGCTCGAA 
AACTATGGCG GGGTGGAAGC GGTTTTTATC ACCAGAGATA AAAAGATCTA TGTCACAGAT 
GGGTTAAAGG ACAGCTTTGA ATTTTTTGAC GAAAGCAAAG AGTACGAATT CGTCAAAGAT 
TGA
 
Protein sequence
MLQSARLVTI SNKEGLEIKE LELLFDKKKC GRKKLSFVAV ALITLGLLTA CNGKPVQQEE 
VKKFESTDIA MGTVISQRVF GDNGQAAIDA ALEKIKSLEA LLTFNAPGGD VNKLNDYAGK 
QSVELQPETL LVLKESQEVA ELSGGAFDVT VGPIVKSWGI GTDNARIPSE TELKELLPLV 
NYKNLLIEGN TAYLKQAGQM VDLGGIAKGY AGDAAIEVYK KQGITSAFIN LGGNVVTLGT 
KPDGSSWTVG VRNPRPAGEE DQIVGMITVA DKAVVTAGDD QRYFEVDGVR YHHILNPHTG 
YPAQSDLMSV TLVTDSSLLA DALDTAVYIL GLEKGREMLE NYGGVEAVFI TRDKKIYVTD 
GLKDSFEFFD ESKEYEFVKD