| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1482 |
|---|
| Symbol | |
|---|
| ID | 7258451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1578078 |
|---|
| End bp | 1579433 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643561390 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002457970 |
|---|
| Protein GI | 219667535 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00895] benzoate transport |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000000115751 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATAT CACAACGAAT AGAAAAATTA CCGGTTAAGA GATTTCACTA TATACTCCTT
ATCTCTGCAG GTTTGGGATG GATGTTCGAT TCCATGGATA CGGGCATTAT TTCCTTTGTC
CTGCCGGTGT TGATGAAGAC TTGGGGGTTA ACACCGGAAC AGGTGGGAAA TATCGGGAGT
GTCGGCCTGT TAGGAATGGC TTTGGGAGCT ATTCTGTCCG GGAGTGTGGC GGATCGAATC
GGCAGAAAAA AGGTCTTTGC CTTTACCTTG GTGGTGTATT CTTTGGCTAC CGGATTATGC
GGCCTGGCCT GGAGCTATGC CTCCCTTTTG TTCTTTCGCT TTCTGGTGGG GTTTGGTTTG
GGAGGGCAAT TGCCGGTTGC GGTAACCTTG GTGAGTGAGT TCACTCCTGC TAAACACCGG
GGAAAATTTC TGGTCCTTTT GGAGAGCTTC TGGGCTATAG GGTGGCTCCT GGCCTCCGTT
ATATCCTATC TGATCATTCC CAACTATGGT TGGCATATTG CTTTCTTCAT TGGTGCCATT
CCGGCTCTTT ACGTTTTTTA TCTCTGGAAG TACATCCCGG AGTCACCGCG GTTTCTTGAG
GAACAGGGAA GAATCCAGGA GGCTGAGGCA GTGTACCGCC TGGTCGCCGG GGAGGCAGGA
CCTGACGTAA AGGCGGGCAG AACTGCTGAG GAGGCAAAAC GTGAACACAG GCAGCCCCAG
AAGGGGACGG CCAAGACTAA GGTGCTGAAG CGAGTCACGG TAGCGGAATT GTTTTCCCGG
AAGTTCCTGC GCAGAACGGT GTTTCTCTGG CTGCTTTGGT TTGGAATCGT ATATTCTTAC
TATGGAATTT TTACCTGGCT GCCCTCTATT CTTGCCTTAA AGGGTTTTTC CCTGACCAAG
AGCTTCAGCT ATGTTATTAT TATGACCTTG GCGCAGATTC CCGGCTATTT CAGCGCGGCA
TTTCTGGTCG ATCGCATTGG GCGCAAGCCT ACCTTGGCCG CTTTCGTTTT AGGGACAGCG
ATCAGCGCTT ATTTCTTTGG ACTGGGCAAC AGTGTAATGA TGATTCTGGT CTTTGGTTCC
CTCATGTCTT TCTTTAACCT TGGCGCCTGG GGAATTCTCT ACACCTATAC TCCTGAGCTT
TATCCTACCA GAGCCCGGGG CACCGGTGCC GGTTGGGCCG CCGGGTTTGG CCGCATCGGC
GGCATCTTAG CACCTATGGT GGTAGGCCGT ATGCTGGGAG CGGAAATGCC TACGGAAACG
GTTTTCCTGA TGTTTGCCGG AGTGCTCATC CTCGTTGTGT TTAATGTCCT CATTCTTGGC
GAAGAGACGA AAGGCCGGCC CATGGATGAA CTATAG
|
|---|
| Protein sequence | MSISQRIEKL PVKRFHYILL ISAGLGWMFD SMDTGIISFV LPVLMKTWGL TPEQVGNIGS
VGLLGMALGA ILSGSVADRI GRKKVFAFTL VVYSLATGLC GLAWSYASLL FFRFLVGFGL
GGQLPVAVTL VSEFTPAKHR GKFLVLLESF WAIGWLLASV ISYLIIPNYG WHIAFFIGAI
PALYVFYLWK YIPESPRFLE EQGRIQEAEA VYRLVAGEAG PDVKAGRTAE EAKREHRQPQ
KGTAKTKVLK RVTVAELFSR KFLRRTVFLW LLWFGIVYSY YGIFTWLPSI LALKGFSLTK
SFSYVIIMTL AQIPGYFSAA FLVDRIGRKP TLAAFVLGTA ISAYFFGLGN SVMMILVFGS
LMSFFNLGAW GILYTYTPEL YPTRARGTGA GWAAGFGRIG GILAPMVVGR MLGAEMPTET
VFLMFAGVLI LVVFNVLILG EETKGRPMDE L
|
|---|
| |